Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3HC1Q86WB0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3HC1Q86WB0 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.24■□□□□ 0.83
ZC3HC1Q86WB0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3HC1Q86WB0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3HC1Q86WB0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3HC1Q86WB0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.24■□□□□ 0.83
ZC3HC1Q86WB0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3HC1Q86WB0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.24■□□□□ 0.83
ZC3HC1Q86WB0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3HC1Q86WB0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.24■□□□□ 0.83
ZC3HC1Q86WB0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3HC1Q86WB0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ZC3HC1Q86WB0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ZC3HC1Q86WB0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3HC1Q86WB0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.24■□□□□ 0.83
ZC3HC1Q86WB0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3HC1Q86WB0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
ZC3HC1Q86WB0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3HC1Q86WB0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3HC1Q86WB0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3HC1Q86WB0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3HC1Q86WB0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3HC1Q86WB0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ZC3HC1Q86WB0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3HC1Q86WB0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3HC1Q86WB0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3HC1Q86WB0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.23■□□□□ 0.83
ZC3HC1Q86WB0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ZC3HC1Q86WB0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ZC3HC1Q86WB0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
ZC3HC1Q86WB0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.23■□□□□ 0.83
ZC3HC1Q86WB0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.23■□□□□ 0.83
ZC3HC1Q86WB0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3HC1Q86WB0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3HC1Q86WB0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3HC1Q86WB0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3HC1Q86WB0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3HC1Q86WB0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
ZC3HC1Q86WB0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.23■□□□□ 0.83
ZC3HC1Q86WB0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.22■□□□□ 0.83
ZC3HC1Q86WB0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ZC3HC1Q86WB0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
ZC3HC1Q86WB0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZC3HC1Q86WB0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.22■□□□□ 0.83
ZC3HC1Q86WB0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.22■□□□□ 0.83
ZC3HC1Q86WB0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZC3HC1Q86WB0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZC3HC1Q86WB0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZC3HC1Q86WB0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
ZC3HC1Q86WB0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.22■□□□□ 0.83
ZC3HC1Q86WB0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZC3HC1Q86WB0 CDV3P1-201ENST00000471403 739 ntBASIC20.22■□□□□ 0.83
ZC3HC1Q86WB0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZC3HC1Q86WB0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ZC3HC1Q86WB0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZC3HC1Q86WB0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.22■□□□□ 0.83
ZC3HC1Q86WB0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZC3HC1Q86WB0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ZC3HC1Q86WB0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZC3HC1Q86WB0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.22■□□□□ 0.83
ZC3HC1Q86WB0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.22■□□□□ 0.83
ZC3HC1Q86WB0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.21■□□□□ 0.83
ZC3HC1Q86WB0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ZC3HC1Q86WB0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ZC3HC1Q86WB0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.21■□□□□ 0.83
ZC3HC1Q86WB0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3HC1Q86WB0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3HC1Q86WB0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.21■□□□□ 0.83
ZC3HC1Q86WB0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3HC1Q86WB0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ZC3HC1Q86WB0 NTF6G-201ENST00000591094 616 ntBASIC20.21■□□□□ 0.83
ZC3HC1Q86WB0 FAM21FP-204ENST00000608637 956 ntBASIC20.21■□□□□ 0.83
ZC3HC1Q86WB0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3HC1Q86WB0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3HC1Q86WB0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
ZC3HC1Q86WB0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
ZC3HC1Q86WB0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3HC1Q86WB0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3HC1Q86WB0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3HC1Q86WB0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3HC1Q86WB0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3HC1Q86WB0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.2■□□□□ 0.82
ZC3HC1Q86WB0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3HC1Q86WB0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ZC3HC1Q86WB0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.2■□□□□ 0.82
ZC3HC1Q86WB0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3HC1Q86WB0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3HC1Q86WB0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ZC3HC1Q86WB0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.2■□□□□ 0.82
ZC3HC1Q86WB0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.2■□□□□ 0.82
ZC3HC1Q86WB0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ZC3HC1Q86WB0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.19■□□□□ 0.82
ZC3HC1Q86WB0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.19■□□□□ 0.82
ZC3HC1Q86WB0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.19■□□□□ 0.82
ZC3HC1Q86WB0 AC097381.1-201ENST00000429019 1296 ntBASIC20.19■□□□□ 0.82
ZC3HC1Q86WB0 AC034268.1-201ENST00000441047 882 ntBASIC20.19■□□□□ 0.82
ZC3HC1Q86WB0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.19■□□□□ 0.82
ZC3HC1Q86WB0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.19■□□□□ 0.82
ZC3HC1Q86WB0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms