Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
NCBP3Q53F19 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
NCBP3Q53F19 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
NCBP3Q53F19 AC092720.2-201ENST00000602388 1665 ntBASIC26.66■■□□□ 1.86
NCBP3Q53F19 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
NCBP3Q53F19 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
NCBP3Q53F19 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
NCBP3Q53F19 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
NCBP3Q53F19 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
NCBP3Q53F19 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC26.66■■□□□ 1.86
NCBP3Q53F19 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
NCBP3Q53F19 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC26.66■■□□□ 1.86
NCBP3Q53F19 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
NCBP3Q53F19 AC105036.2-201ENST00000569468 176 ntBASIC26.66■■□□□ 1.86
NCBP3Q53F19 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
NCBP3Q53F19 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
NCBP3Q53F19 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
NCBP3Q53F19 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
NCBP3Q53F19 AC073314.1-201ENST00000568729 2216 ntBASIC26.66■■□□□ 1.86
NCBP3Q53F19 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
NCBP3Q53F19 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
NCBP3Q53F19 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NCBP3Q53F19 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC26.65■■□□□ 1.86
NCBP3Q53F19 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
NCBP3Q53F19 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC26.65■■□□□ 1.86
NCBP3Q53F19 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NCBP3Q53F19 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC26.65■■□□□ 1.86
NCBP3Q53F19 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
NCBP3Q53F19 TSPY6P-201ENST00000448518 926 ntBASIC26.65■■□□□ 1.86
NCBP3Q53F19 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC26.65■■□□□ 1.86
NCBP3Q53F19 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC26.65■■□□□ 1.86
NCBP3Q53F19 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC26.65■■□□□ 1.86
NCBP3Q53F19 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
NCBP3Q53F19 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC26.65■■□□□ 1.86
NCBP3Q53F19 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC26.65■■□□□ 1.86
NCBP3Q53F19 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC26.65■■□□□ 1.86
NCBP3Q53F19 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
NCBP3Q53F19 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NCBP3Q53F19 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NCBP3Q53F19 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
NCBP3Q53F19 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NCBP3Q53F19 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
NCBP3Q53F19 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
NCBP3Q53F19 AC006970.2-201ENST00000450065 779 ntBASIC26.64■■□□□ 1.86
NCBP3Q53F19 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC26.64■■□□□ 1.86
NCBP3Q53F19 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC26.64■■□□□ 1.86
NCBP3Q53F19 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC26.64■■□□□ 1.86
NCBP3Q53F19 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC26.64■■□□□ 1.86
NCBP3Q53F19 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC26.64■■□□□ 1.86
NCBP3Q53F19 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
NCBP3Q53F19 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC26.64■■□□□ 1.86
NCBP3Q53F19 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.85
NCBP3Q53F19 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC26.64■■□□□ 1.85
NCBP3Q53F19 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
NCBP3Q53F19 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
NCBP3Q53F19 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
NCBP3Q53F19 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
NCBP3Q53F19 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
NCBP3Q53F19 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
NCBP3Q53F19 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
NCBP3Q53F19 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC26.63■■□□□ 1.85
NCBP3Q53F19 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
NCBP3Q53F19 MKRN4P-201ENST00000444706 1521 ntBASIC26.63■■□□□ 1.85
NCBP3Q53F19 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC26.63■■□□□ 1.85
NCBP3Q53F19 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC26.63■■□□□ 1.85
NCBP3Q53F19 LINC01521-201ENST00000504184 1943 ntBASIC26.63■■□□□ 1.85
NCBP3Q53F19 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
NCBP3Q53F19 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
NCBP3Q53F19 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
NCBP3Q53F19 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC26.62■■□□□ 1.85
NCBP3Q53F19 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
NCBP3Q53F19 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC26.62■■□□□ 1.85
NCBP3Q53F19 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
NCBP3Q53F19 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC26.62■■□□□ 1.85
NCBP3Q53F19 KRT17P1-201ENST00000399211 1546 ntBASIC26.62■■□□□ 1.85
NCBP3Q53F19 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
NCBP3Q53F19 AL355472.2-201ENST00000422958 438 ntBASIC26.62■■□□□ 1.85
NCBP3Q53F19 AC073210.2-201ENST00000430369 194 ntBASIC26.62■■□□□ 1.85
NCBP3Q53F19 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
NCBP3Q53F19 TK2-208ENST00000545043 1120 ntTSL 2 BASIC26.62■■□□□ 1.85
NCBP3Q53F19 ISCU-212ENST00000547005 795 ntTSL 3 BASIC26.62■■□□□ 1.85
NCBP3Q53F19 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC26.62■■□□□ 1.85
NCBP3Q53F19 AC092118.2-201ENST00000613495 667 ntBASIC26.62■■□□□ 1.85
NCBP3Q53F19 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC26.62■■□□□ 1.85
NCBP3Q53F19 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
NCBP3Q53F19 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
NCBP3Q53F19 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
NCBP3Q53F19 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
NCBP3Q53F19 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
NCBP3Q53F19 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
NCBP3Q53F19 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
NCBP3Q53F19 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
NCBP3Q53F19 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
NCBP3Q53F19 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
NCBP3Q53F19 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC26.61■■□□□ 1.85
NCBP3Q53F19 GPX1P1-201ENST00000388829 606 ntBASIC26.61■■□□□ 1.85
NCBP3Q53F19 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
NCBP3Q53F19 OR13I1P-201ENST00000609811 1264 ntBASIC26.61■■□□□ 1.85
NCBP3Q53F19 TMEM14EP-202ENST00000639378 1296 ntBASIC26.61■■□□□ 1.85
NCBP3Q53F19 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms