Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.83■■□□□ 1.09
CTC1Q2NKJ3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CTC1Q2NKJ3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CTC1Q2NKJ3 AL135905.2-201ENST00000584934 1404 ntBASIC21.83■■□□□ 1.09
CTC1Q2NKJ3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CTC1Q2NKJ3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CTC1Q2NKJ3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CTC1Q2NKJ3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CTC1Q2NKJ3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CTC1Q2NKJ3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.83■■□□□ 1.09
CTC1Q2NKJ3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.83■■□□□ 1.09
CTC1Q2NKJ3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.83■■□□□ 1.09
CTC1Q2NKJ3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CTC1Q2NKJ3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.83■■□□□ 1.08
CTC1Q2NKJ3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CTC1Q2NKJ3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CTC1Q2NKJ3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTC1Q2NKJ3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTC1Q2NKJ3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CTC1Q2NKJ3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.82■■□□□ 1.08
CTC1Q2NKJ3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTC1Q2NKJ3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.82■■□□□ 1.08
CTC1Q2NKJ3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.82■■□□□ 1.08
CTC1Q2NKJ3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.82■■□□□ 1.08
CTC1Q2NKJ3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.82■■□□□ 1.08
CTC1Q2NKJ3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.82■■□□□ 1.08
CTC1Q2NKJ3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.82■■□□□ 1.08
CTC1Q2NKJ3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CTC1Q2NKJ3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTC1Q2NKJ3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CTC1Q2NKJ3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CTC1Q2NKJ3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.82■■□□□ 1.08
CTC1Q2NKJ3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTC1Q2NKJ3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 AC080038.3-201ENST00000623346 1952 ntBASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 AC113410.3-201ENST00000623366 203 ntBASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 AL023875.1-201ENST00000640777 796 ntBASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CTC1Q2NKJ3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTC1Q2NKJ3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.8■■□□□ 1.08
CTC1Q2NKJ3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTC1Q2NKJ3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
CTC1Q2NKJ3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CTC1Q2NKJ3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTC1Q2NKJ3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTC1Q2NKJ3 CYP21A1P-202ENST00000354927 1481 ntBASIC21.8■■□□□ 1.08
CTC1Q2NKJ3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CTC1Q2NKJ3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTC1Q2NKJ3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTC1Q2NKJ3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTC1Q2NKJ3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.8■■□□□ 1.08
CTC1Q2NKJ3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.8■■□□□ 1.08
CTC1Q2NKJ3 AL445228.2-201ENST00000605589 952 ntBASIC21.8■■□□□ 1.08
CTC1Q2NKJ3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CTC1Q2NKJ3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTC1Q2NKJ3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.8■■□□□ 1.08
CTC1Q2NKJ3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTC1Q2NKJ3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTC1Q2NKJ3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTC1Q2NKJ3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTC1Q2NKJ3 AC007322.3-201ENST00000426526 701 ntBASIC21.79■■□□□ 1.08
CTC1Q2NKJ3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.79■■□□□ 1.08
CTC1Q2NKJ3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.79■■□□□ 1.08
CTC1Q2NKJ3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CTC1Q2NKJ3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.79■■□□□ 1.08
CTC1Q2NKJ3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
CTC1Q2NKJ3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
CTC1Q2NKJ3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTC1Q2NKJ3 AC105020.6-201ENST00000621523 1217 ntBASIC21.79■■□□□ 1.08
CTC1Q2NKJ3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.79■■□□□ 1.08
CTC1Q2NKJ3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTC1Q2NKJ3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CTC1Q2NKJ3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.79■■□□□ 1.08
CTC1Q2NKJ3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTC1Q2NKJ3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CTC1Q2NKJ3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CTC1Q2NKJ3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTC1Q2NKJ3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms