Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.48■□□□□ 0.39
UBA52P62987 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBA52P62987 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBA52P62987 KRT18P11-201ENST00000435214 1283 ntBASIC17.48■□□□□ 0.39
UBA52P62987 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.48■□□□□ 0.39
UBA52P62987 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.48■□□□□ 0.39
UBA52P62987 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.48■□□□□ 0.39
UBA52P62987 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.48■□□□□ 0.39
UBA52P62987 SMUG1P1-201ENST00000590640 811 ntBASIC17.48■□□□□ 0.39
UBA52P62987 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
UBA52P62987 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBA52P62987 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBA52P62987 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.48■□□□□ 0.39
UBA52P62987 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.48■□□□□ 0.39
UBA52P62987 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBA52P62987 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBA52P62987 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
UBA52P62987 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
UBA52P62987 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBA52P62987 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
UBA52P62987 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBA52P62987 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBA52P62987 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBA52P62987 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
UBA52P62987 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
UBA52P62987 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.47■□□□□ 0.39
UBA52P62987 AC011767.1-201ENST00000617410 1153 ntBASIC17.47■□□□□ 0.39
UBA52P62987 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBA52P62987 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBA52P62987 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBA52P62987 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBA52P62987 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBA52P62987 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBA52P62987 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBA52P62987 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.46■□□□□ 0.39
UBA52P62987 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBA52P62987 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.46■□□□□ 0.39
UBA52P62987 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBA52P62987 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBA52P62987 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.46■□□□□ 0.39
UBA52P62987 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.46■□□□□ 0.39
UBA52P62987 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.46■□□□□ 0.39
UBA52P62987 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBA52P62987 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.46■□□□□ 0.39
UBA52P62987 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBA52P62987 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
UBA52P62987 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.46■□□□□ 0.39
UBA52P62987 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBA52P62987 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBA52P62987 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
UBA52P62987 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
UBA52P62987 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA52P62987 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
UBA52P62987 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBA52P62987 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.45■□□□□ 0.38
UBA52P62987 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA52P62987 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
UBA52P62987 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA52P62987 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.45■□□□□ 0.38
UBA52P62987 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA52P62987 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA52P62987 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA52P62987 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.45■□□□□ 0.38
UBA52P62987 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.45■□□□□ 0.38
UBA52P62987 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.45■□□□□ 0.38
UBA52P62987 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBA52P62987 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA52P62987 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
UBA52P62987 NCF1B-203ENST00000435988 1254 ntBASIC17.45■□□□□ 0.38
UBA52P62987 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBA52P62987 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.45■□□□□ 0.38
UBA52P62987 AC079140.4-201ENST00000507448 529 ntBASIC17.45■□□□□ 0.38
UBA52P62987 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.45■□□□□ 0.38
UBA52P62987 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.45■□□□□ 0.38
UBA52P62987 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.45■□□□□ 0.38
UBA52P62987 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.45■□□□□ 0.38
UBA52P62987 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA52P62987 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.45■□□□□ 0.38
UBA52P62987 AC138932.1-201ENST00000534164 6830 ntBASIC17.45■□□□□ 0.38
UBA52P62987 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.45■□□□□ 0.38
UBA52P62987 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA52P62987 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBA52P62987 PCDHAC2-203ENST00000615316 3011 ntBASIC17.45■□□□□ 0.38
UBA52P62987 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.44■□□□□ 0.38
UBA52P62987 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.44■□□□□ 0.38
UBA52P62987 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.44■□□□□ 0.38
UBA52P62987 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.44■□□□□ 0.38
UBA52P62987 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
UBA52P62987 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBA52P62987 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBA52P62987 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBA52P62987 ABHD17AP1-201ENST00000358206 933 ntBASIC17.44■□□□□ 0.38
UBA52P62987 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBA52P62987 MIR663A-201ENST00000385250 93 ntBASIC17.44■□□□□ 0.38
UBA52P62987 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.44■□□□□ 0.38
UBA52P62987 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBA52P62987 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.44■□□□□ 0.38
UBA52P62987 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.44■□□□□ 0.38
UBA52P62987 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
UBA52P62987 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms