Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH13P55290 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH13P55290 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH13P55290 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH13P55290 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CDH13P55290 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.89■□□□□ 0.77
CDH13P55290 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CDH13P55290 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CDH13P55290 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.89■□□□□ 0.77
CDH13P55290 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
CDH13P55290 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.89■□□□□ 0.77
CDH13P55290 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.89■□□□□ 0.77
CDH13P55290 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDH13P55290 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDH13P55290 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.89■□□□□ 0.77
CDH13P55290 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH13P55290 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.89■□□□□ 0.77
CDH13P55290 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.89■□□□□ 0.77
CDH13P55290 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH13P55290 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH13P55290 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
CDH13P55290 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH13P55290 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH13P55290 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDH13P55290 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.88■□□□□ 0.77
CDH13P55290 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDH13P55290 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.88■□□□□ 0.77
CDH13P55290 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.88■□□□□ 0.77
CDH13P55290 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CDH13P55290 AC091799.1-201ENST00000422823 811 ntBASIC19.88■□□□□ 0.77
CDH13P55290 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.88■□□□□ 0.77
CDH13P55290 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.88■□□□□ 0.77
CDH13P55290 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.88■□□□□ 0.77
CDH13P55290 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDH13P55290 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDH13P55290 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDH13P55290 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CDH13P55290 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.87■□□□□ 0.77
CDH13P55290 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH13P55290 RBM17P2-201ENST00000616397 1405 ntBASIC19.87■□□□□ 0.77
CDH13P55290 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDH13P55290 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.87■□□□□ 0.77
CDH13P55290 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH13P55290 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH13P55290 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CDH13P55290 KRT18P61-201ENST00000585825 1298 ntBASIC19.87■□□□□ 0.77
CDH13P55290 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.87■□□□□ 0.77
CDH13P55290 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH13P55290 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CDH13P55290 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDH13P55290 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH13P55290 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH13P55290 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH13P55290 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH13P55290 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CDH13P55290 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.86■□□□□ 0.77
CDH13P55290 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.86■□□□□ 0.77
CDH13P55290 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH13P55290 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH13P55290 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH13P55290 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.86■□□□□ 0.77
CDH13P55290 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.86■□□□□ 0.77
CDH13P55290 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.86■□□□□ 0.77
CDH13P55290 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH13P55290 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.86■□□□□ 0.77
CDH13P55290 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.86■□□□□ 0.77
CDH13P55290 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH13P55290 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH13P55290 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH13P55290 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH13P55290 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH13P55290 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH13P55290 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.85■□□□□ 0.77
CDH13P55290 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CDH13P55290 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH13P55290 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH13P55290 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH13P55290 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH13P55290 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
CDH13P55290 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH13P55290 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.85■□□□□ 0.77
CDH13P55290 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.85■□□□□ 0.77
CDH13P55290 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH13P55290 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.85■□□□□ 0.77
CDH13P55290 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.85■□□□□ 0.77
CDH13P55290 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.85■□□□□ 0.77
CDH13P55290 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.85■□□□□ 0.77
CDH13P55290 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH13P55290 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDH13P55290 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH13P55290 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CDH13P55290 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH13P55290 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH13P55290 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CDH13P55290 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH13P55290 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH13P55290 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH13P55290 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH13P55290 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
CDH13P55290 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms