Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCLP35914 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
HMGCLP35914 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCLP35914 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCLP35914 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
HMGCLP35914 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.31■□□□□ 0.84
HMGCLP35914 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
HMGCLP35914 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCLP35914 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.31■□□□□ 0.84
HMGCLP35914 BX276092.2-201ENST00000417668 665 ntBASIC20.31■□□□□ 0.84
HMGCLP35914 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.31■□□□□ 0.84
HMGCLP35914 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.31■□□□□ 0.84
HMGCLP35914 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.31■□□□□ 0.84
HMGCLP35914 AL109923.1-201ENST00000618799 583 ntBASIC20.31■□□□□ 0.84
HMGCLP35914 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCLP35914 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.31■□□□□ 0.84
HMGCLP35914 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCLP35914 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCLP35914 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCLP35914 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCLP35914 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCLP35914 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCLP35914 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCLP35914 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCLP35914 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCLP35914 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.3■□□□□ 0.84
HMGCLP35914 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCLP35914 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCLP35914 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCLP35914 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.3■□□□□ 0.84
HMGCLP35914 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCLP35914 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCLP35914 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCLP35914 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.3■□□□□ 0.84
HMGCLP35914 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCLP35914 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCLP35914 AC092720.2-201ENST00000602388 1665 ntBASIC20.3■□□□□ 0.84
HMGCLP35914 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCLP35914 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HMGCLP35914 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCLP35914 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCLP35914 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCLP35914 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.3■□□□□ 0.84
HMGCLP35914 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.3■□□□□ 0.84
HMGCLP35914 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.3■□□□□ 0.84
HMGCLP35914 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.3■□□□□ 0.84
HMGCLP35914 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCLP35914 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCLP35914 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.3■□□□□ 0.84
HMGCLP35914 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCLP35914 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.3■□□□□ 0.84
HMGCLP35914 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCLP35914 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCLP35914 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCLP35914 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.3■□□□□ 0.84
HMGCLP35914 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCLP35914 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMGCLP35914 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMGCLP35914 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMGCLP35914 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.29■□□□□ 0.84
HMGCLP35914 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.29■□□□□ 0.84
HMGCLP35914 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HMGCLP35914 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HMGCLP35914 LSM12P1-201ENST00000411836 588 ntBASIC20.29■□□□□ 0.84
HMGCLP35914 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMGCLP35914 AC104771.1-201ENST00000603335 964 ntBASIC20.29■□□□□ 0.84
HMGCLP35914 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMGCLP35914 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
HMGCLP35914 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMGCLP35914 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
HMGCLP35914 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HMGCLP35914 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.29■□□□□ 0.84
HMGCLP35914 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMGCLP35914 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMGCLP35914 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HMGCLP35914 AC020907.5-201ENST00000624372 1936 ntBASIC20.28■□□□□ 0.84
HMGCLP35914 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HMGCLP35914 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.28■□□□□ 0.84
HMGCLP35914 AC092118.2-201ENST00000613495 667 ntBASIC20.28■□□□□ 0.84
HMGCLP35914 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.28■□□□□ 0.84
HMGCLP35914 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HMGCLP35914 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.28■□□□□ 0.84
HMGCLP35914 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HMGCLP35914 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.28■□□□□ 0.84
HMGCLP35914 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMGCLP35914 GABARAPL3-202ENST00000624044 1851 ntBASIC20.28■□□□□ 0.84
HMGCLP35914 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
HMGCLP35914 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HMGCLP35914 AL157384.1-201ENST00000445995 2473 ntBASIC20.28■□□□□ 0.84
HMGCLP35914 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMGCLP35914 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.27■□□□□ 0.84
HMGCLP35914 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.27■□□□□ 0.84
HMGCLP35914 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
HMGCLP35914 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMGCLP35914 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.27■□□□□ 0.84
HMGCLP35914 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HMGCLP35914 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
HMGCLP35914 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
HMGCLP35914 ID1-201ENST00000376105 1233 ntBASIC20.27■□□□□ 0.84
HMGCLP35914 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms