Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN6P29350 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.33■□□□□ 0.68
PTPN6P29350 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.33■□□□□ 0.68
PTPN6P29350 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
PTPN6P29350 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.33■□□□□ 0.68
PTPN6P29350 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
PTPN6P29350 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PTPN6P29350 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN6P29350 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN6P29350 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PTPN6P29350 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN6P29350 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN6P29350 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN6P29350 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN6P29350 TCF3P1-201ENST00000423021 1937 ntBASIC19.32■□□□□ 0.68
PTPN6P29350 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN6P29350 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.32■□□□□ 0.68
PTPN6P29350 AC016769.1-201ENST00000409132 1010 ntBASIC19.32■□□□□ 0.68
PTPN6P29350 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.32■□□□□ 0.68
PTPN6P29350 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.32■□□□□ 0.68
PTPN6P29350 AC007952.6-201ENST00000573168 2673 ntBASIC19.32■□□□□ 0.68
PTPN6P29350 AC003957.1-201ENST00000625108 2673 ntBASIC19.32■□□□□ 0.68
PTPN6P29350 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.32■□□□□ 0.68
PTPN6P29350 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN6P29350 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PTPN6P29350 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN6P29350 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
PTPN6P29350 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN6P29350 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PTPN6P29350 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN6P29350 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN6P29350 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN6P29350 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.31■□□□□ 0.68
PTPN6P29350 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN6P29350 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN6P29350 AC245052.3-201ENST00000450182 901 ntBASIC19.31■□□□□ 0.68
PTPN6P29350 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PTPN6P29350 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.31■□□□□ 0.68
PTPN6P29350 MIR2861-201ENST00000636310 90 ntBASIC19.31■□□□□ 0.68
PTPN6P29350 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PTPN6P29350 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PTPN6P29350 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.31■□□□□ 0.68
PTPN6P29350 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.31■□□□□ 0.68
PTPN6P29350 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN6P29350 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN6P29350 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN6P29350 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.31■□□□□ 0.68
PTPN6P29350 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN6P29350 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN6P29350 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN6P29350 AC004911.1-201ENST00000416316 871 ntBASIC19.3■□□□□ 0.68
PTPN6P29350 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.3■□□□□ 0.68
PTPN6P29350 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.3■□□□□ 0.68
PTPN6P29350 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PTPN6P29350 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.3■□□□□ 0.68
PTPN6P29350 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PTPN6P29350 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.3■□□□□ 0.68
PTPN6P29350 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN6P29350 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN6P29350 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PTPN6P29350 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPN6P29350 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.29■□□□□ 0.68
PTPN6P29350 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
PTPN6P29350 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN6P29350 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPN6P29350 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN6P29350 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN6P29350 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN6P29350 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN6P29350 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN6P29350 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPN6P29350 SLC7A5P2-201ENST00000553010 536 ntBASIC19.29■□□□□ 0.68
PTPN6P29350 AP001160.3-201ENST00000601484 763 ntBASIC19.29■□□□□ 0.68
PTPN6P29350 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.29■□□□□ 0.68
PTPN6P29350 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN6P29350 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN6P29350 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN6P29350 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN6P29350 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN6P29350 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN6P29350 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.29■□□□□ 0.68
PTPN6P29350 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.29■□□□□ 0.68
PTPN6P29350 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.28■□□□□ 0.68
PTPN6P29350 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPN6P29350 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN6P29350 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN6P29350 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN6P29350 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN6P29350 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN6P29350 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN6P29350 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN6P29350 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN6P29350 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN6P29350 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN6P29350 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PTPN6P29350 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN6P29350 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPN6P29350 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPN6P29350 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.28■□□□□ 0.68
PTPN6P29350 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms