Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CDKL5O76039 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDKL5O76039 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.69■■□□□ 1.38
CDKL5O76039 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC23.69■■□□□ 1.38
CDKL5O76039 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDKL5O76039 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.69■■□□□ 1.38
CDKL5O76039 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CDKL5O76039 AC069236.1-201ENST00000604339 616 ntBASIC23.69■■□□□ 1.38
CDKL5O76039 AC100791.3-201ENST00000617619 330 ntBASIC23.69■■□□□ 1.38
CDKL5O76039 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDKL5O76039 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.69■■□□□ 1.38
CDKL5O76039 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC23.69■■□□□ 1.38
CDKL5O76039 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
CDKL5O76039 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDKL5O76039 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDKL5O76039 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDKL5O76039 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDKL5O76039 CYP2T1P-201ENST00000432607 1285 ntBASIC23.68■■□□□ 1.38
CDKL5O76039 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.68■■□□□ 1.38
CDKL5O76039 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.68■■□□□ 1.38
CDKL5O76039 AC092437.1-201ENST00000624794 1048 ntBASIC23.68■■□□□ 1.38
CDKL5O76039 AC008694.1-202ENST00000636953 945 ntBASIC23.68■■□□□ 1.38
CDKL5O76039 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDKL5O76039 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
CDKL5O76039 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDKL5O76039 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDKL5O76039 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC23.68■■□□□ 1.38
CDKL5O76039 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDKL5O76039 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CDKL5O76039 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDKL5O76039 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.67■■□□□ 1.38
CDKL5O76039 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDKL5O76039 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.67■■□□□ 1.38
CDKL5O76039 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDKL5O76039 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDKL5O76039 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CDKL5O76039 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CDKL5O76039 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDKL5O76039 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDKL5O76039 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDKL5O76039 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.67■■□□□ 1.38
CDKL5O76039 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.67■■□□□ 1.38
CDKL5O76039 AL137784.2-201ENST00000607332 1000 ntBASIC23.67■■□□□ 1.38
CDKL5O76039 AL356652.1-201ENST00000615962 565 ntBASIC23.67■■□□□ 1.38
CDKL5O76039 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDKL5O76039 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC23.67■■□□□ 1.38
CDKL5O76039 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDKL5O76039 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.67■■□□□ 1.38
CDKL5O76039 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDKL5O76039 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CDKL5O76039 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CDKL5O76039 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CDKL5O76039 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CDKL5O76039 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CDKL5O76039 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CDKL5O76039 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.66■■□□□ 1.38
CDKL5O76039 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDKL5O76039 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CDKL5O76039 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CDKL5O76039 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDKL5O76039 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDKL5O76039 MCRIP2P1-201ENST00000394346 511 ntBASIC23.65■■□□□ 1.38
CDKL5O76039 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
CDKL5O76039 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.65■■□□□ 1.38
CDKL5O76039 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.65■■□□□ 1.38
CDKL5O76039 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.65■■□□□ 1.38
CDKL5O76039 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.65■■□□□ 1.38
CDKL5O76039 IKBKGP1-201ENST00000612193 1073 ntBASIC23.65■■□□□ 1.38
CDKL5O76039 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.65■■□□□ 1.38
CDKL5O76039 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CDKL5O76039 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDKL5O76039 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
CDKL5O76039 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDKL5O76039 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC23.65■■□□□ 1.38
CDKL5O76039 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CDKL5O76039 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC23.64■■□□□ 1.38
CDKL5O76039 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDKL5O76039 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDKL5O76039 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.38
CDKL5O76039 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDKL5O76039 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
CDKL5O76039 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.64■■□□□ 1.37
CDKL5O76039 AC080038.1-201ENST00000611274 1154 ntBASIC23.64■■□□□ 1.37
CDKL5O76039 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CDKL5O76039 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.64■■□□□ 1.37
CDKL5O76039 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.64■■□□□ 1.37
CDKL5O76039 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDKL5O76039 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.64■■□□□ 1.37
CDKL5O76039 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.64■■□□□ 1.37
CDKL5O76039 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDKL5O76039 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
CDKL5O76039 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDKL5O76039 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDKL5O76039 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
CDKL5O76039 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDKL5O76039 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDKL5O76039 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDKL5O76039 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.63■■□□□ 1.37
CDKL5O76039 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDKL5O76039 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms