Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
TAF4O00268 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TAF4O00268 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TAF4O00268 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TAF4O00268 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.88■□□□□ 0.77
TAF4O00268 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.88■□□□□ 0.77
TAF4O00268 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TAF4O00268 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
TAF4O00268 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TAF4O00268 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.88■□□□□ 0.77
TAF4O00268 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.88■□□□□ 0.77
TAF4O00268 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TAF4O00268 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TAF4O00268 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.88■□□□□ 0.77
TAF4O00268 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TAF4O00268 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TAF4O00268 PNMA6B-201ENST00000538162 1200 ntBASIC19.88■□□□□ 0.77
TAF4O00268 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.88■□□□□ 0.77
TAF4O00268 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.88■□□□□ 0.77
TAF4O00268 AC069544.1-201ENST00000609399 999 ntBASIC19.88■□□□□ 0.77
TAF4O00268 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.88■□□□□ 0.77
TAF4O00268 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TAF4O00268 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TAF4O00268 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TAF4O00268 AC139530.1-201ENST00000575312 1977 ntBASIC19.88■□□□□ 0.77
TAF4O00268 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
TAF4O00268 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TAF4O00268 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TAF4O00268 AP004607.7-201ENST00000527152 1677 ntBASIC19.87■□□□□ 0.77
TAF4O00268 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TAF4O00268 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TAF4O00268 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TAF4O00268 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TAF4O00268 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
TAF4O00268 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TAF4O00268 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TAF4O00268 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TAF4O00268 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TAF4O00268 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TAF4O00268 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TAF4O00268 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.87■□□□□ 0.77
TAF4O00268 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
TAF4O00268 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.87■□□□□ 0.77
TAF4O00268 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.87■□□□□ 0.77
TAF4O00268 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TAF4O00268 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.87■□□□□ 0.77
TAF4O00268 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TAF4O00268 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TAF4O00268 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.86■□□□□ 0.77
TAF4O00268 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TAF4O00268 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TAF4O00268 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TAF4O00268 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TAF4O00268 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TAF4O00268 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.86■□□□□ 0.77
TAF4O00268 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.86■□□□□ 0.77
TAF4O00268 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TAF4O00268 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TAF4O00268 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TAF4O00268 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.86■□□□□ 0.77
TAF4O00268 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.86■□□□□ 0.77
TAF4O00268 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.86■□□□□ 0.77
TAF4O00268 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.86■□□□□ 0.77
TAF4O00268 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.86■□□□□ 0.77
TAF4O00268 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.86■□□□□ 0.77
TAF4O00268 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TAF4O00268 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TAF4O00268 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TAF4O00268 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.86■□□□□ 0.77
TAF4O00268 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TAF4O00268 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TAF4O00268 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.86■□□□□ 0.77
TAF4O00268 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TAF4O00268 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.86■□□□□ 0.77
TAF4O00268 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TAF4O00268 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.85■□□□□ 0.77
TAF4O00268 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TAF4O00268 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.85■□□□□ 0.77
TAF4O00268 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.85■□□□□ 0.77
TAF4O00268 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.85■□□□□ 0.77
TAF4O00268 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.85■□□□□ 0.77
TAF4O00268 CD177P1-201ENST00000606252 935 ntBASIC19.85■□□□□ 0.77
TAF4O00268 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TAF4O00268 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TAF4O00268 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.85■□□□□ 0.77
TAF4O00268 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TAF4O00268 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TAF4O00268 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
TAF4O00268 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TAF4O00268 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TAF4O00268 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TAF4O00268 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TAF4O00268 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TAF4O00268 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TAF4O00268 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TAF4O00268 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TAF4O00268 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TAF4O00268 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.84■□□□□ 0.77
TAF4O00268 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.84■□□□□ 0.77
TAF4O00268 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms