Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
PDLIM1O00151 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM1O00151 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PDLIM1O00151 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.33■□□□□ 0.69
PDLIM1O00151 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
PDLIM1O00151 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.33■□□□□ 0.69
PDLIM1O00151 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDLIM1O00151 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDLIM1O00151 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
PDLIM1O00151 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.33■□□□□ 0.69
PDLIM1O00151 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.33■□□□□ 0.69
PDLIM1O00151 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.33■□□□□ 0.69
PDLIM1O00151 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
PDLIM1O00151 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.33■□□□□ 0.69
PDLIM1O00151 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDLIM1O00151 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
PDLIM1O00151 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.33■□□□□ 0.68
PDLIM1O00151 AC105265.2-201ENST00000467189 838 ntBASIC19.33■□□□□ 0.68
PDLIM1O00151 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDLIM1O00151 AC126544.1-201ENST00000580842 1059 ntBASIC19.33■□□□□ 0.68
PDLIM1O00151 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.33■□□□□ 0.68
PDLIM1O00151 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDLIM1O00151 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.33■□□□□ 0.68
PDLIM1O00151 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
PDLIM1O00151 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PDLIM1O00151 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.32■□□□□ 0.68
PDLIM1O00151 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDLIM1O00151 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDLIM1O00151 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDLIM1O00151 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDLIM1O00151 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.32■□□□□ 0.68
PDLIM1O00151 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDLIM1O00151 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.32■□□□□ 0.68
PDLIM1O00151 ZNRF2P3-201ENST00000424200 374 ntBASIC19.32■□□□□ 0.68
PDLIM1O00151 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.32■□□□□ 0.68
PDLIM1O00151 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDLIM1O00151 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PDLIM1O00151 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDLIM1O00151 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.32■□□□□ 0.68
PDLIM1O00151 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDLIM1O00151 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.32■□□□□ 0.68
PDLIM1O00151 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDLIM1O00151 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.31■□□□□ 0.68
PDLIM1O00151 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDLIM1O00151 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.31■□□□□ 0.68
PDLIM1O00151 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.31■□□□□ 0.68
PDLIM1O00151 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PDLIM1O00151 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDLIM1O00151 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PDLIM1O00151 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDLIM1O00151 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDLIM1O00151 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.31■□□□□ 0.68
PDLIM1O00151 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.31■□□□□ 0.68
PDLIM1O00151 IGHV3-19-201ENST00000521488 291 ntBASIC19.31■□□□□ 0.68
PDLIM1O00151 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PDLIM1O00151 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
PDLIM1O00151 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PDLIM1O00151 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM1O00151 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PDLIM1O00151 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM1O00151 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.3■□□□□ 0.68
PDLIM1O00151 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM1O00151 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM1O00151 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM1O00151 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM1O00151 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PDLIM1O00151 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.3■□□□□ 0.68
PDLIM1O00151 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.3■□□□□ 0.68
PDLIM1O00151 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM1O00151 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM1O00151 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PDLIM1O00151 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.3■□□□□ 0.68
PDLIM1O00151 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM1O00151 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM1O00151 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM1O00151 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM1O00151 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PDLIM1O00151 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM1O00151 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM1O00151 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM1O00151 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
PDLIM1O00151 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PDLIM1O00151 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM1O00151 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.29■□□□□ 0.68
PDLIM1O00151 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.29■□□□□ 0.68
PDLIM1O00151 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM1O00151 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.29■□□□□ 0.68
PDLIM1O00151 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM1O00151 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM1O00151 AC004408.2-201ENST00000623613 2777 ntBASIC19.29■□□□□ 0.68
PDLIM1O00151 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM1O00151 AP006587.3-201ENST00000525742 1516 ntBASIC19.29■□□□□ 0.68
PDLIM1O00151 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
PDLIM1O00151 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM1O00151 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.28■□□□□ 0.68
PDLIM1O00151 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM1O00151 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.28■□□□□ 0.68
PDLIM1O00151 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM1O00151 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM1O00151 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms