Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHISA3A0PJX4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
SHISA3A0PJX4 AP004607.4-201ENST00000530158 1459 ntBASIC17.77■□□□□ 0.44
SHISA3A0PJX4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SHISA3A0PJX4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SHISA3A0PJX4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHISA3A0PJX4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHISA3A0PJX4 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.77■□□□□ 0.44
SHISA3A0PJX4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.77■□□□□ 0.44
SHISA3A0PJX4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHISA3A0PJX4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.77■□□□□ 0.43
SHISA3A0PJX4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHISA3A0PJX4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHISA3A0PJX4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.77■□□□□ 0.43
SHISA3A0PJX4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
SHISA3A0PJX4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SHISA3A0PJX4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHISA3A0PJX4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHISA3A0PJX4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHISA3A0PJX4 AC093503.3-201ENST00000624917 2352 ntBASIC17.76■□□□□ 0.43
SHISA3A0PJX4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.76■□□□□ 0.43
SHISA3A0PJX4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.76■□□□□ 0.43
SHISA3A0PJX4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHISA3A0PJX4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHISA3A0PJX4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.76■□□□□ 0.43
SHISA3A0PJX4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHISA3A0PJX4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHISA3A0PJX4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHISA3A0PJX4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHISA3A0PJX4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHISA3A0PJX4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SHISA3A0PJX4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHISA3A0PJX4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
SHISA3A0PJX4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHISA3A0PJX4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.76■□□□□ 0.43
SHISA3A0PJX4 EEF1DP3-203ENST00000566025 782 ntBASIC17.76■□□□□ 0.43
SHISA3A0PJX4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHISA3A0PJX4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHISA3A0PJX4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHISA3A0PJX4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SHISA3A0PJX4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHISA3A0PJX4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SHISA3A0PJX4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHISA3A0PJX4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SHISA3A0PJX4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SHISA3A0PJX4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHISA3A0PJX4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHISA3A0PJX4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHISA3A0PJX4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SHISA3A0PJX4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHISA3A0PJX4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SHISA3A0PJX4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.75■□□□□ 0.43
SHISA3A0PJX4 DUX4L19-201ENST00000557448 1267 ntBASIC17.75■□□□□ 0.43
SHISA3A0PJX4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.75■□□□□ 0.43
SHISA3A0PJX4 MIR4466-201ENST00000606121 54 ntBASIC17.75■□□□□ 0.43
SHISA3A0PJX4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SHISA3A0PJX4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.75■□□□□ 0.43
SHISA3A0PJX4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHISA3A0PJX4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHISA3A0PJX4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SHISA3A0PJX4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SHISA3A0PJX4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHISA3A0PJX4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHISA3A0PJX4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHISA3A0PJX4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHISA3A0PJX4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHISA3A0PJX4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHISA3A0PJX4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.74■□□□□ 0.43
SHISA3A0PJX4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHISA3A0PJX4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.74■□□□□ 0.43
SHISA3A0PJX4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.74■□□□□ 0.43
SHISA3A0PJX4 TMEM179-206ENST00000616017 1645 ntBASIC17.74■□□□□ 0.43
SHISA3A0PJX4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHISA3A0PJX4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHISA3A0PJX4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHISA3A0PJX4 MIR2861-201ENST00000636310 90 ntBASIC17.74■□□□□ 0.43
SHISA3A0PJX4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.74■□□□□ 0.43
SHISA3A0PJX4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.74■□□□□ 0.43
SHISA3A0PJX4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHISA3A0PJX4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.74■□□□□ 0.43
SHISA3A0PJX4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHISA3A0PJX4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHISA3A0PJX4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHISA3A0PJX4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHISA3A0PJX4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SHISA3A0PJX4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.73■□□□□ 0.43
SHISA3A0PJX4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SHISA3A0PJX4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHISA3A0PJX4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SHISA3A0PJX4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.73■□□□□ 0.43
SHISA3A0PJX4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHISA3A0PJX4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.73■□□□□ 0.43
SHISA3A0PJX4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHISA3A0PJX4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHISA3A0PJX4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHISA3A0PJX4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
SHISA3A0PJX4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SHISA3A0PJX4 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.73■□□□□ 0.43
SHISA3A0PJX4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.73■□□□□ 0.43
SHISA3A0PJX4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 7.1 ms