Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SNX18Q96RF0 PSMC1P9-201ENST00000396338 1335 ntBASIC7.96□□□□□ -1.14
SNX18Q96RF0 LRRC37A11P-201ENST00000425901 3580 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
SNX18Q96RF0 SERPINB9-201ENST00000380698 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SNX18Q96RF0 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
SNX18Q96RF0 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
SNX18Q96RF0 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
SNX18Q96RF0 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
SNX18Q96RF0 CASP8-205ENST00000358485 2930 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
SNX18Q96RF0 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SNX18Q96RF0 NFIA-206ENST00000371191 1916 ntTSL 5 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SNX18Q96RF0 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 SLC10A7-201ENST00000335472 2798 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SNX18Q96RF0 ACSM6-202ENST00000341686 1712 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 LINC02254-201ENST00000558621 1726 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SNX18Q96RF0 LINC01719-204ENST00000611275 2054 ntTSL 5 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
SNX18Q96RF0 PSMA5-206ENST00000538610 1504 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SNX18Q96RF0 OR51E1-202ENST00000530215 2942 ntBASIC7.95□□□□□ -1.14
SNX18Q96RF0 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 LINC01858-201ENST00000564534 1838 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SNX18Q96RF0 AL109811.1-201ENST00000452378 2682 ntTSL 2 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SNX18Q96RF0 AC009967.1-201ENST00000379462 793 ntBASIC7.95□□□□□ -1.14
SNX18Q96RF0 MT1X-201ENST00000394485 450 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SNX18Q96RF0 STPG3-202ENST00000412566 1191 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SNX18Q96RF0 RPL4P5-201ENST00000413888 1276 ntBASIC7.95□□□□□ -1.14
SNX18Q96RF0 NPM1P12-201ENST00000423757 834 ntBASIC7.95□□□□□ -1.14
SNX18Q96RF0 AC009501.2-201ENST00000428700 312 ntBASIC7.95□□□□□ -1.14
SNX18Q96RF0 Z83838.1-201ENST00000431036 925 ntBASIC7.95□□□□□ -1.14
SNX18Q96RF0 ARL17B-201ENST00000434041 798 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SNX18Q96RF0 ARL17A-203ENST00000445552 798 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
SNX18Q96RF0 AC098613.1-201ENST00000451485 656 ntTSL 3 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 HNRNPA1P43-201ENST00000452680 910 ntBASIC7.95□□□□□ -1.14
SNX18Q96RF0 LINC01738-201ENST00000454285 815 ntTSL 3 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 AL683842.1-201ENST00000455505 525 ntBASIC7.95□□□□□ -1.14
SNX18Q96RF0 AC117382.1-201ENST00000468074 730 ntBASIC7.95□□□□□ -1.14
SNX18Q96RF0 ACPP-203ENST00000475741 1242 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SNX18Q96RF0 AC016968.1-201ENST00000479610 697 ntTSL 3 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 NBPF22P-201ENST00000508988 1143 ntBASIC7.95□□□□□ -1.14
SNX18Q96RF0 AC010457.1-202ENST00000510137 337 ntTSL 2 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 AC114324.2-201ENST00000510435 680 ntTSL 3 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 KRTAP9-12P-201ENST00000514388 532 ntBASIC7.95□□□□□ -1.14
SNX18Q96RF0 AC098679.3-203ENST00000514881 919 ntBASIC7.95□□□□□ -1.14
SNX18Q96RF0 AC011632.1-203ENST00000522914 454 ntTSL 3 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 AC023232.1-201ENST00000524963 285 ntBASIC7.95□□□□□ -1.14
SNX18Q96RF0 AC090625.2-201ENST00000534165 518 ntTSL 3 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 AC069208.1-206ENST00000538905 832 ntTSL 4 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 KLF5-205ENST00000539231 2951 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SNX18Q96RF0 LINC01579-201ENST00000553818 561 ntTSL 4 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 ASB9P1-201ENST00000557146 793 ntBASIC7.95□□□□□ -1.14
SNX18Q96RF0 AC127029.1-201ENST00000560822 237 ntBASIC7.95□□□□□ -1.14
SNX18Q96RF0 ZNF559-203ENST00000585352 967 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SNX18Q96RF0 PSG10P-202ENST00000597171 1283 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SNX18Q96RF0 ZNF85-208ENST00000597314 563 ntTSL 4 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 LAMTOR5-AS1-211ENST00000598350 749 ntTSL 5 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 SRD5A3-AS1-212ENST00000601433 754 ntTSL 5 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 AC004840.2-201ENST00000603368 285 ntBASIC7.95□□□□□ -1.14
SNX18Q96RF0 AC112187.3-201ENST00000607844 408 ntBASIC7.95□□□□□ -1.14
SNX18Q96RF0 Metazoa_SRP.101-201ENST00000611704 303 ntBASIC7.95□□□□□ -1.14
SNX18Q96RF0 AL354718.2-201ENST00000618030 371 ntTSL 2 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 STPG3-205ENST00000620243 1025 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SNX18Q96RF0 LINC02028-221ENST00000622169 621 ntTSL 5 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 IPO4-221ENST00000625289 297 ntTSL 5 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SNX18Q96RF0 OR7E24-201ENST00000456448 1550 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 PIWIL3-202ENST00000527701 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
SNX18Q96RF0 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 TBC1D8B-206ENST00000481617 4098 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SNX18Q96RF0 AC012158.1-203ENST00000488306 1352 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SNX18Q96RF0 AC105233.5-202ENST00000642083 4132 ntBASIC7.95□□□□□ -1.14
SNX18Q96RF0 GJC1-201ENST00000330514 3295 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 RBFOX2-207ENST00000414461 1706 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SNX18Q96RF0 MAPT-AS1-204ENST00000634876 3602 ntTSL 5 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SNX18Q96RF0 PUS3-205ENST00000613398 1419 ntTSL 2 BASIC7.95□□□□□ -1.14
SNX18Q96RF0 LINC01692-201ENST00000441009 2719 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SNX18Q96RF0 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SNX18Q96RF0 CEP128-209ENST00000555265 4662 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
SNX18Q96RF0 SERPIND1-201ENST00000215727 2437 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SNX18Q96RF0 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SNX18Q96RF0 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC7.94□□□□□ -1.14
SNX18Q96RF0 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SNX18Q96RF0 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
SNX18Q96RF0 SSBP2-212ENST00000509053 1534 ntTSL 2 BASIC7.94□□□□□ -1.14
SNX18Q96RF0 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SNX18Q96RF0 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC7.94□□□□□ -1.14
SNX18Q96RF0 KIAA1328-203ENST00000586501 1577 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SNX18Q96RF0 AC115619.1-201ENST00000567376 1605 ntBASIC7.94□□□□□ -1.14
SNX18Q96RF0 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SNX18Q96RF0 RXFP2-202ENST00000380314 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
SNX18Q96RF0 CLEC2A-201ENST00000339766 732 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SNX18Q96RF0 PRH2-202ENST00000396400 673 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SNX18Q96RF0 ING4-203ENST00000412586 741 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SNX18Q96RF0 ATP5HP4-201ENST00000414313 475 ntBASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms