Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 LINC00608-202ENST00000432733 2818 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 OR51E1-202ENST00000530215 2942 ntBASIC9.2□□□□□ -0.94
LMO3Q8TAP4 TXLNG-201ENST00000380122 4401 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 USP40-203ENST00000427112 3744 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 SMC6-207ENST00000448223 5233 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 EPHA5-201ENST00000273854 8266 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 IBSP-201ENST00000226284 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 ZNF410-224ENST00000615736 1551 ntTSL 5 BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 SCNN1G-201ENST00000300061 3507 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 PTPN20-205ENST00000395721 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 AC019155.2-201ENST00000420224 1918 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 SERPINA10-201ENST00000261994 4978 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 MTA3-204ENST00000406911 2041 ntAPPRIS ALT1 TSL 5 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 SRGAP2B-204ENST00000612199 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 PTBP2-201ENST00000370197 3057 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 SLC30A8-201ENST00000427715 5430 ntTSL 2 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 PAQR5-205ENST00000561153 2347 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 PTPRA-204ENST00000380393 3636 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 NVL-202ENST00000340871 2431 ntTSL 2 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 SCGB1D2-201ENST00000244926 480 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 LCN1-201ENST00000263598 776 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 SUGT1P3-201ENST00000304932 1051 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 SMIM7-201ENST00000358726 850 ntTSL 2 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 PAGE5-202ENST00000374952 428 ntTSL 5 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 BPI-202ENST00000417318 1082 ntTSL 5 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 AL355526.1-201ENST00000420347 215 ntTSL 5 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 LINC02093-201ENST00000440522 485 ntTSL 5 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 SPATA24-203ENST00000451821 646 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 AC010307.4-202ENST00000507403 389 ntTSL 3 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 AL158819.1-201ENST00000514681 398 ntBASIC9.19□□□□□ -0.94
LMO3Q8TAP4 AC087354.1-201ENST00000522373 1037 ntTSL 5 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 AC018653.2-201ENST00000540190 238 ntBASIC9.19□□□□□ -0.94
LMO3Q8TAP4 AP002892.2-201ENST00000544195 560 ntTSL 4 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 AC078865.1-201ENST00000547174 562 ntTSL 4 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 CD63-206ENST00000548160 648 ntTSL 2 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 AC034102.7-201ENST00000550840 470 ntTSL 5 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 LINC02295-201ENST00000557072 374 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 AL358334.1-201ENST00000557152 174 ntTSL 5 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 MPPE1P1-201ENST00000557286 1076 ntBASIC9.19□□□□□ -0.94
LMO3Q8TAP4 AC010536.2-201ENST00000563036 338 ntTSL 3 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 DYM-207ENST00000578396 755 ntTSL 3 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 AC008991.2-201ENST00000587850 487 ntTSL 3 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 AC233702.11-201ENST00000598588 333 ntBASIC9.19□□□□□ -0.94
LMO3Q8TAP4 GZMB-209ENST00000616551 559 ntTSL 2 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 Z99916.3-201ENST00000623422 1080 ntBASIC9.19□□□□□ -0.94
LMO3Q8TAP4 Z98043.1-201ENST00000624123 339 ntBASIC9.19□□□□□ -0.94
LMO3Q8TAP4 AC010894.5-201ENST00000624428 951 ntBASIC9.19□□□□□ -0.94
LMO3Q8TAP4 CDKL5-209ENST00000635828 3823 ntTSL 5 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 STMND1-203ENST00000536551 1322 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 AC008817.1-201ENST00000504215 1562 ntBASIC9.19□□□□□ -0.94
LMO3Q8TAP4 CPEB4-209ENST00000522336 1551 ntTSL 5 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 AC073349.2-201ENST00000427545 1603 ntBASIC9.19□□□□□ -0.94
LMO3Q8TAP4 MAGEE1-201ENST00000361470 3630 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 FRMPD4-202ENST00000616992 7916 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 ADAM2-205ENST00000521880 2125 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 ZSCAN20-201ENST00000361328 4316 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 ZNF185-212ENST00000539731 4334 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 MAMLD1-204ENST00000426613 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 TTC33-205ENST00000636106 2252 ntTSL 5 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
LMO3Q8TAP4 TRIM55-204ENST00000353317 2624 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
LMO3Q8TAP4 ZNF33A-208ENST00000628825 2854 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
LMO3Q8TAP4 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
LMO3Q8TAP4 THADA-202ENST00000402360 2974 ntTSL 5 BASIC9.18□□□□□ -0.94
LMO3Q8TAP4 MTTP-208ENST00000511045 3154 ntTSL 2 BASIC9.18□□□□□ -0.94
LMO3Q8TAP4 LINC00672-201ENST00000583195 3692 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LMO3Q8TAP4 ARID1B-232ENST00000637904 5913 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
LMO3Q8TAP4 IL4-202ENST00000350025 414 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
LMO3Q8TAP4 SLC17A2-202ENST00000360488 2270 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
LMO3Q8TAP4 MIR146B-201ENST00000365699 73 ntBASIC9.18□□□□□ -0.94
LMO3Q8TAP4 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LMO3Q8TAP4 ZSCAN31-202ENST00000396838 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LMO3Q8TAP4 CCRL2-204ENST00000400882 1642 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
LMO3Q8TAP4 DNAJC5G-204ENST00000406962 1562 ntTSL 5 BASIC9.18□□□□□ -0.94
LMO3Q8TAP4 CCDC129-202ENST00000407970 3269 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
LMO3Q8TAP4 LYG1-202ENST00000409448 1038 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LMO3Q8TAP4 AL136380.2-201ENST00000411837 492 ntBASIC9.18□□□□□ -0.94
LMO3Q8TAP4 AC109826.1-201ENST00000419865 1424 ntTSL 5 BASIC9.18□□□□□ -0.94
LMO3Q8TAP4 AC116050.1-206ENST00000423774 213 ntBASIC9.18□□□□□ -0.94
LMO3Q8TAP4 AL360295.1-201ENST00000425435 1824 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
LMO3Q8TAP4 AC005099.1-201ENST00000442083 610 ntBASIC9.18□□□□□ -0.94
LMO3Q8TAP4 AL157714.1-201ENST00000448964 625 ntBASIC9.18□□□□□ -0.94
LMO3Q8TAP4 AL450023.2-201ENST00000453276 545 ntBASIC9.18□□□□□ -0.94
LMO3Q8TAP4 AL591866.1-201ENST00000456162 401 ntBASIC9.18□□□□□ -0.94
LMO3Q8TAP4 AC002384.1-202ENST00000470135 673 ntTSL 5 BASIC9.18□□□□□ -0.94
LMO3Q8TAP4 CSTA-202ENST00000479204 821 ntTSL 2 BASIC9.18□□□□□ -0.94
LMO3Q8TAP4 AC093768.1-201ENST00000505987 2173 ntBASIC9.18□□□□□ -0.94
LMO3Q8TAP4 LINC01331-201ENST00000507781 568 ntTSL 4 BASIC9.18□□□□□ -0.94
LMO3Q8TAP4 CFL1P5-201ENST00000508046 502 ntBASIC9.18□□□□□ -0.94
LMO3Q8TAP4 FAM13A-213ENST00000509094 2762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
LMO3Q8TAP4 AC098679.2-201ENST00000513067 365 ntTSL 2 BASIC9.18□□□□□ -0.94
LMO3Q8TAP4 AC114550.1-202ENST00000522661 643 ntTSL 2 BASIC9.18□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms