Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA6Q9Y5G7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PCDHGA6Q9Y5G7 PRORSD1P-201ENST00000295112 541 ntBASIC19.63■□□□□ 0.73
PCDHGA6Q9Y5G7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA6Q9Y5G7 DUSP5P2-201ENST00000426873 1033 ntBASIC19.63■□□□□ 0.73
PCDHGA6Q9Y5G7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
PCDHGA6Q9Y5G7 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGA6Q9Y5G7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHGA6Q9Y5G7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA6Q9Y5G7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PCDHGA6Q9Y5G7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PCDHGA6Q9Y5G7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA6Q9Y5G7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA6Q9Y5G7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHGA6Q9Y5G7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA6Q9Y5G7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PCDHGA6Q9Y5G7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHGA6Q9Y5G7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA6Q9Y5G7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHGA6Q9Y5G7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGA6Q9Y5G7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA6Q9Y5G7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA6Q9Y5G7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA6Q9Y5G7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGA6Q9Y5G7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.62■□□□□ 0.73
PCDHGA6Q9Y5G7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHGA6Q9Y5G7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.62■□□□□ 0.73
PCDHGA6Q9Y5G7 FAM21FP-204ENST00000608637 956 ntBASIC19.62■□□□□ 0.73
PCDHGA6Q9Y5G7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA6Q9Y5G7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA6Q9Y5G7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA6Q9Y5G7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA6Q9Y5G7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
PCDHGA6Q9Y5G7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA6Q9Y5G7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PCDHGA6Q9Y5G7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA6Q9Y5G7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHGA6Q9Y5G7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHGA6Q9Y5G7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA6Q9Y5G7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PCDHGA6Q9Y5G7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
PCDHGA6Q9Y5G7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA6Q9Y5G7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHGA6Q9Y5G7 AC100791.3-201ENST00000617619 330 ntBASIC19.61■□□□□ 0.73
PCDHGA6Q9Y5G7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHGA6Q9Y5G7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHGA6Q9Y5G7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA6Q9Y5G7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
PCDHGA6Q9Y5G7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA6Q9Y5G7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PCDHGA6Q9Y5G7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA6Q9Y5G7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 ESRRAP1-201ENST00000400596 1257 ntBASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 AC093827.2-201ENST00000512654 315 ntBASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PCDHGA6Q9Y5G7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA6Q9Y5G7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA6Q9Y5G7 LINC01006-201ENST00000333319 2292 ntBASIC19.59■□□□□ 0.73
PCDHGA6Q9Y5G7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA6Q9Y5G7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA6Q9Y5G7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHGA6Q9Y5G7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
PCDHGA6Q9Y5G7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA6Q9Y5G7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA6Q9Y5G7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PCDHGA6Q9Y5G7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHGA6Q9Y5G7 AC091799.1-201ENST00000422823 811 ntBASIC19.59■□□□□ 0.73
PCDHGA6Q9Y5G7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHGA6Q9Y5G7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.59■□□□□ 0.73
PCDHGA6Q9Y5G7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA6Q9Y5G7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA6Q9Y5G7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA6Q9Y5G7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms