Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF346Q9UL40 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF346Q9UL40 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF346Q9UL40 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF346Q9UL40 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF346Q9UL40 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF346Q9UL40 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
ZNF346Q9UL40 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ZNF346Q9UL40 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF346Q9UL40 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
ZNF346Q9UL40 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF346Q9UL40 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF346Q9UL40 KRT18P5-201ENST00000436075 1291 ntBASIC18.34■□□□□ 0.53
ZNF346Q9UL40 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.34■□□□□ 0.53
ZNF346Q9UL40 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF346Q9UL40 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.34■□□□□ 0.53
ZNF346Q9UL40 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF346Q9UL40 NTF6G-201ENST00000591094 616 ntBASIC18.34■□□□□ 0.53
ZNF346Q9UL40 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.34■□□□□ 0.53
ZNF346Q9UL40 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF346Q9UL40 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ZNF346Q9UL40 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF346Q9UL40 AFG3L1P-217ENST00000557444 2447 ntBASIC18.34■□□□□ 0.53
ZNF346Q9UL40 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF346Q9UL40 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF346Q9UL40 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ZNF346Q9UL40 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ZNF346Q9UL40 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF346Q9UL40 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ZNF346Q9UL40 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF346Q9UL40 AL512408.1-201ENST00000569378 2000 ntBASIC18.33■□□□□ 0.53
ZNF346Q9UL40 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF346Q9UL40 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
ZNF346Q9UL40 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF346Q9UL40 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF346Q9UL40 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.33■□□□□ 0.53
ZNF346Q9UL40 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ZNF346Q9UL40 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF346Q9UL40 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ZNF346Q9UL40 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF346Q9UL40 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
ZNF346Q9UL40 UBE2DNL-204ENST00000602536 740 ntBASIC18.33■□□□□ 0.52
ZNF346Q9UL40 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.33■□□□□ 0.52
ZNF346Q9UL40 MIR2861-201ENST00000636310 90 ntBASIC18.33■□□□□ 0.52
ZNF346Q9UL40 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF346Q9UL40 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF346Q9UL40 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ZNF346Q9UL40 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF346Q9UL40 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF346Q9UL40 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF346Q9UL40 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
ZNF346Q9UL40 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF346Q9UL40 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF346Q9UL40 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ZNF346Q9UL40 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF346Q9UL40 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF346Q9UL40 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF346Q9UL40 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF346Q9UL40 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.32■□□□□ 0.52
ZNF346Q9UL40 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF346Q9UL40 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF346Q9UL40 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF346Q9UL40 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF346Q9UL40 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF346Q9UL40 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ZNF346Q9UL40 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
ZNF346Q9UL40 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF346Q9UL40 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF346Q9UL40 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF346Q9UL40 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF346Q9UL40 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ZNF346Q9UL40 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF346Q9UL40 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
ZNF346Q9UL40 AC092720.2-201ENST00000602388 1665 ntBASIC18.31■□□□□ 0.52
ZNF346Q9UL40 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF346Q9UL40 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF346Q9UL40 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF346Q9UL40 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ZNF346Q9UL40 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF346Q9UL40 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF346Q9UL40 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ZNF346Q9UL40 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF346Q9UL40 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.31■□□□□ 0.52
ZNF346Q9UL40 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF346Q9UL40 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ZNF346Q9UL40 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF346Q9UL40 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF346Q9UL40 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF346Q9UL40 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.31■□□□□ 0.52
ZNF346Q9UL40 AC092666.2-201ENST00000613287 246 ntBASIC18.31■□□□□ 0.52
ZNF346Q9UL40 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ZNF346Q9UL40 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF346Q9UL40 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF346Q9UL40 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF346Q9UL40 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF346Q9UL40 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF346Q9UL40 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF346Q9UL40 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF346Q9UL40 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF346Q9UL40 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms