Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CTSFQ9UBX1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTSFQ9UBX1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.24■□□□□ 0.67
CTSFQ9UBX1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTSFQ9UBX1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.24■□□□□ 0.67
CTSFQ9UBX1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.24■□□□□ 0.67
CTSFQ9UBX1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTSFQ9UBX1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTSFQ9UBX1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.23■□□□□ 0.67
CTSFQ9UBX1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CTSFQ9UBX1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSFQ9UBX1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.23■□□□□ 0.67
CTSFQ9UBX1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSFQ9UBX1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSFQ9UBX1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTSFQ9UBX1 PGM5P4-201ENST00000421970 445 ntBASIC19.23■□□□□ 0.67
CTSFQ9UBX1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.23■□□□□ 0.67
CTSFQ9UBX1 UNC93B5-201ENST00000530315 699 ntBASIC19.23■□□□□ 0.67
CTSFQ9UBX1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CTSFQ9UBX1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.23■□□□□ 0.67
CTSFQ9UBX1 AC060766.5-201ENST00000590539 871 ntBASIC19.23■□□□□ 0.67
CTSFQ9UBX1 AL356652.1-201ENST00000615962 565 ntBASIC19.23■□□□□ 0.67
CTSFQ9UBX1 HLA-B-256ENST00000639848 1089 ntBASIC19.23■□□□□ 0.67
CTSFQ9UBX1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTSFQ9UBX1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSFQ9UBX1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSFQ9UBX1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTSFQ9UBX1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSFQ9UBX1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTSFQ9UBX1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSFQ9UBX1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTSFQ9UBX1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.22■□□□□ 0.67
CTSFQ9UBX1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CTSFQ9UBX1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTSFQ9UBX1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSFQ9UBX1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSFQ9UBX1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSFQ9UBX1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTSFQ9UBX1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTSFQ9UBX1 ITM2C-210ENST00000620962 501 ntBASIC19.22■□□□□ 0.67
CTSFQ9UBX1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSFQ9UBX1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.21■□□□□ 0.67
CTSFQ9UBX1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTSFQ9UBX1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTSFQ9UBX1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTSFQ9UBX1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CTSFQ9UBX1 KRT18P29-201ENST00000397031 1267 ntBASIC19.21■□□□□ 0.67
CTSFQ9UBX1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.21■□□□□ 0.67
CTSFQ9UBX1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.21■□□□□ 0.67
CTSFQ9UBX1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.21■□□□□ 0.67
CTSFQ9UBX1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.21■□□□□ 0.67
CTSFQ9UBX1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.21■□□□□ 0.67
CTSFQ9UBX1 C2orf69P4-201ENST00000565394 541 ntBASIC19.21■□□□□ 0.67
CTSFQ9UBX1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.21■□□□□ 0.67
CTSFQ9UBX1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTSFQ9UBX1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTSFQ9UBX1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.21■□□□□ 0.67
CTSFQ9UBX1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CTSFQ9UBX1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CTSFQ9UBX1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
CTSFQ9UBX1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.21■□□□□ 0.67
CTSFQ9UBX1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.2■□□□□ 0.66
CTSFQ9UBX1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
CTSFQ9UBX1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTSFQ9UBX1 AC092368.3-202ENST00000574180 1591 ntBASIC19.2■□□□□ 0.66
CTSFQ9UBX1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTSFQ9UBX1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
CTSFQ9UBX1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.2■□□□□ 0.66
CTSFQ9UBX1 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.2■□□□□ 0.66
CTSFQ9UBX1 AP003097.1-201ENST00000530657 1135 ntBASIC19.2■□□□□ 0.66
CTSFQ9UBX1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CTSFQ9UBX1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTSFQ9UBX1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTSFQ9UBX1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CTSFQ9UBX1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTSFQ9UBX1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.2■□□□□ 0.66
CTSFQ9UBX1 AC121338.2-201ENST00000622535 1744 ntBASIC19.2■□□□□ 0.66
CTSFQ9UBX1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTSFQ9UBX1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTSFQ9UBX1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTSFQ9UBX1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.19■□□□□ 0.66
CTSFQ9UBX1 AC026310.3-201ENST00000625186 2373 ntBASIC19.19■□□□□ 0.66
CTSFQ9UBX1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTSFQ9UBX1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTSFQ9UBX1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.19■□□□□ 0.66
CTSFQ9UBX1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTSFQ9UBX1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTSFQ9UBX1 PNMA6B-201ENST00000538162 1200 ntBASIC19.19■□□□□ 0.66
CTSFQ9UBX1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.19■□□□□ 0.66
CTSFQ9UBX1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTSFQ9UBX1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTSFQ9UBX1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.19■□□□□ 0.66
CTSFQ9UBX1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTSFQ9UBX1 AC027702.1-201ENST00000563810 1770 ntBASIC19.19■□□□□ 0.66
CTSFQ9UBX1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.19■□□□□ 0.66
CTSFQ9UBX1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTSFQ9UBX1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.18■□□□□ 0.66
CTSFQ9UBX1 PRORSD1P-201ENST00000295112 541 ntBASIC19.18■□□□□ 0.66
CTSFQ9UBX1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTSFQ9UBX1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms