Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.1■■□□□ 1.13
CXXC1Q9P0U4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.1■■□□□ 1.13
CXXC1Q9P0U4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CXXC1Q9P0U4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.1■■□□□ 1.13
CXXC1Q9P0U4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CXXC1Q9P0U4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CXXC1Q9P0U4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.1■■□□□ 1.13
CXXC1Q9P0U4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CXXC1Q9P0U4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.09■■□□□ 1.13
CXXC1Q9P0U4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CXXC1Q9P0U4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
CXXC1Q9P0U4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CXXC1Q9P0U4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CXXC1Q9P0U4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.09■■□□□ 1.13
CXXC1Q9P0U4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
CXXC1Q9P0U4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CXXC1Q9P0U4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.09■■□□□ 1.13
CXXC1Q9P0U4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
CXXC1Q9P0U4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CXXC1Q9P0U4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CXXC1Q9P0U4 KRT16P5-201ENST00000455284 522 ntBASIC22.09■■□□□ 1.13
CXXC1Q9P0U4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC22.09■■□□□ 1.13
CXXC1Q9P0U4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC22.09■■□□□ 1.13
CXXC1Q9P0U4 AP000525.1-201ENST00000608286 694 ntBASIC22.09■■□□□ 1.13
CXXC1Q9P0U4 AL356652.1-201ENST00000615962 565 ntBASIC22.09■■□□□ 1.13
CXXC1Q9P0U4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.08■■□□□ 1.13
CXXC1Q9P0U4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.08■■□□□ 1.13
CXXC1Q9P0U4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
CXXC1Q9P0U4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CXXC1Q9P0U4 AC113347.1-201ENST00000413321 391 ntBASIC22.08■■□□□ 1.13
CXXC1Q9P0U4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC22.08■■□□□ 1.13
CXXC1Q9P0U4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CXXC1Q9P0U4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
CXXC1Q9P0U4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.08■■□□□ 1.12
CXXC1Q9P0U4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
CXXC1Q9P0U4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CXXC1Q9P0U4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CXXC1Q9P0U4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CXXC1Q9P0U4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
CXXC1Q9P0U4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC22.07■■□□□ 1.12
CXXC1Q9P0U4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22.07■■□□□ 1.12
CXXC1Q9P0U4 PGM5P4-201ENST00000421970 445 ntBASIC22.07■■□□□ 1.12
CXXC1Q9P0U4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC22.07■■□□□ 1.12
CXXC1Q9P0U4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.07■■□□□ 1.12
CXXC1Q9P0U4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.07■■□□□ 1.12
CXXC1Q9P0U4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC22.07■■□□□ 1.12
CXXC1Q9P0U4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.07■■□□□ 1.12
CXXC1Q9P0U4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.07■■□□□ 1.12
CXXC1Q9P0U4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CXXC1Q9P0U4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.07■■□□□ 1.12
CXXC1Q9P0U4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
CXXC1Q9P0U4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
CXXC1Q9P0U4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
CXXC1Q9P0U4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.06■■□□□ 1.12
CXXC1Q9P0U4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
CXXC1Q9P0U4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CXXC1Q9P0U4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CXXC1Q9P0U4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC22.06■■□□□ 1.12
CXXC1Q9P0U4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.06■■□□□ 1.12
CXXC1Q9P0U4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.06■■□□□ 1.12
CXXC1Q9P0U4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC22.06■■□□□ 1.12
CXXC1Q9P0U4 DUT-205ENST00000558813 769 ntTSL 2 BASIC22.06■■□□□ 1.12
CXXC1Q9P0U4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.06■■□□□ 1.12
CXXC1Q9P0U4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC22.06■■□□□ 1.12
CXXC1Q9P0U4 REXO1L10P-201ENST00000615707 1290 ntBASIC22.06■■□□□ 1.12
CXXC1Q9P0U4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
CXXC1Q9P0U4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CXXC1Q9P0U4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.06■■□□□ 1.12
CXXC1Q9P0U4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CXXC1Q9P0U4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
CXXC1Q9P0U4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CXXC1Q9P0U4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
CXXC1Q9P0U4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CXXC1Q9P0U4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CXXC1Q9P0U4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.05■■□□□ 1.12
CXXC1Q9P0U4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.05■■□□□ 1.12
CXXC1Q9P0U4 LINC01568-207ENST00000641790 1380 ntBASIC22.05■■□□□ 1.12
CXXC1Q9P0U4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CXXC1Q9P0U4 AL353807.1-201ENST00000427475 662 ntBASIC22.05■■□□□ 1.12
CXXC1Q9P0U4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC22.05■■□□□ 1.12
CXXC1Q9P0U4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.05■■□□□ 1.12
CXXC1Q9P0U4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CXXC1Q9P0U4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.05■■□□□ 1.12
CXXC1Q9P0U4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC22.05■■□□□ 1.12
CXXC1Q9P0U4 AL121829.2-201ENST00000620908 328 ntBASIC22.05■■□□□ 1.12
CXXC1Q9P0U4 AC124283.5-201ENST00000624661 1809 ntBASIC22.05■■□□□ 1.12
CXXC1Q9P0U4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.05■■□□□ 1.12
CXXC1Q9P0U4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.05■■□□□ 1.12
CXXC1Q9P0U4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CXXC1Q9P0U4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CXXC1Q9P0U4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
CXXC1Q9P0U4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.04■■□□□ 1.12
CXXC1Q9P0U4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CXXC1Q9P0U4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CXXC1Q9P0U4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CXXC1Q9P0U4 MIR1238-201ENST00000408483 83 ntBASIC22.04■■□□□ 1.12
CXXC1Q9P0U4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
CXXC1Q9P0U4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC22.04■■□□□ 1.12
CXXC1Q9P0U4 F2R-202ENST00000505600 442 ntTSL 2 BASIC22.04■■□□□ 1.12
CXXC1Q9P0U4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms