Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRCC1Q9NPI7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
KRCC1Q9NPI7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRCC1Q9NPI7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
KRCC1Q9NPI7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
KRCC1Q9NPI7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRCC1Q9NPI7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
KRCC1Q9NPI7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRCC1Q9NPI7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.7■□□□□ 0.58
KRCC1Q9NPI7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRCC1Q9NPI7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
KRCC1Q9NPI7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KRCC1Q9NPI7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KRCC1Q9NPI7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRCC1Q9NPI7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRCC1Q9NPI7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRCC1Q9NPI7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRCC1Q9NPI7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KRCC1Q9NPI7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.7■□□□□ 0.58
KRCC1Q9NPI7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.69■□□□□ 0.58
KRCC1Q9NPI7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
KRCC1Q9NPI7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.69■□□□□ 0.58
KRCC1Q9NPI7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.69■□□□□ 0.58
KRCC1Q9NPI7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRCC1Q9NPI7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRCC1Q9NPI7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRCC1Q9NPI7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.69■□□□□ 0.58
KRCC1Q9NPI7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
KRCC1Q9NPI7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.69■□□□□ 0.58
KRCC1Q9NPI7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
KRCC1Q9NPI7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.68■□□□□ 0.58
KRCC1Q9NPI7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRCC1Q9NPI7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRCC1Q9NPI7 AL162377.1-201ENST00000618844 1793 ntBASIC18.68■□□□□ 0.58
KRCC1Q9NPI7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRCC1Q9NPI7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRCC1Q9NPI7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRCC1Q9NPI7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRCC1Q9NPI7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
KRCC1Q9NPI7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.68■□□□□ 0.58
KRCC1Q9NPI7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRCC1Q9NPI7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRCC1Q9NPI7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.68■□□□□ 0.58
KRCC1Q9NPI7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.68■□□□□ 0.58
KRCC1Q9NPI7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
KRCC1Q9NPI7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
KRCC1Q9NPI7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
KRCC1Q9NPI7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRCC1Q9NPI7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
KRCC1Q9NPI7 AL512408.1-201ENST00000569378 2000 ntBASIC18.67■□□□□ 0.58
KRCC1Q9NPI7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
KRCC1Q9NPI7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRCC1Q9NPI7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
KRCC1Q9NPI7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRCC1Q9NPI7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRCC1Q9NPI7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRCC1Q9NPI7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
KRCC1Q9NPI7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRCC1Q9NPI7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRCC1Q9NPI7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRCC1Q9NPI7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRCC1Q9NPI7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRCC1Q9NPI7 AL031432.3-201ENST00000607698 485 ntBASIC18.67■□□□□ 0.58
KRCC1Q9NPI7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRCC1Q9NPI7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.67■□□□□ 0.58
KRCC1Q9NPI7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRCC1Q9NPI7 AC116050.2-201ENST00000612102 1779 ntBASIC18.67■□□□□ 0.58
KRCC1Q9NPI7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRCC1Q9NPI7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRCC1Q9NPI7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRCC1Q9NPI7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRCC1Q9NPI7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRCC1Q9NPI7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
KRCC1Q9NPI7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 AC142381.2-201ENST00000566120 298 ntBASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 RARRES2P11-201ENST00000635158 484 ntBASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms