Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.49■□□□□ 0.55
HMG20AQ9NP66 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20AQ9NP66 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20AQ9NP66 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20AQ9NP66 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20AQ9NP66 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.48■□□□□ 0.55
HMG20AQ9NP66 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMG20AQ9NP66 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.48■□□□□ 0.55
HMG20AQ9NP66 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
HMG20AQ9NP66 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
HMG20AQ9NP66 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMG20AQ9NP66 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMG20AQ9NP66 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMG20AQ9NP66 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMG20AQ9NP66 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMG20AQ9NP66 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HMG20AQ9NP66 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HMG20AQ9NP66 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.48■□□□□ 0.55
HMG20AQ9NP66 pRNA.6-201ENST00000610482 90 ntBASIC18.48■□□□□ 0.55
HMG20AQ9NP66 pRNA.5-201ENST00000612139 90 ntBASIC18.48■□□□□ 0.55
HMG20AQ9NP66 pRNA.11-201ENST00000618423 90 ntBASIC18.48■□□□□ 0.55
HMG20AQ9NP66 pRNA.13-201ENST00000619112 90 ntBASIC18.48■□□□□ 0.55
HMG20AQ9NP66 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
HMG20AQ9NP66 AC133637.1-201ENST00000624115 1537 ntBASIC18.48■□□□□ 0.55
HMG20AQ9NP66 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMG20AQ9NP66 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
HMG20AQ9NP66 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
HMG20AQ9NP66 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20AQ9NP66 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20AQ9NP66 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20AQ9NP66 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
HMG20AQ9NP66 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20AQ9NP66 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20AQ9NP66 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
HMG20AQ9NP66 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20AQ9NP66 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20AQ9NP66 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20AQ9NP66 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.47■□□□□ 0.55
HMG20AQ9NP66 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.47■□□□□ 0.55
HMG20AQ9NP66 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.47■□□□□ 0.55
HMG20AQ9NP66 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
HMG20AQ9NP66 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20AQ9NP66 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20AQ9NP66 AL356441.2-201ENST00000443009 864 ntBASIC18.47■□□□□ 0.55
HMG20AQ9NP66 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.47■□□□□ 0.55
HMG20AQ9NP66 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.47■□□□□ 0.55
HMG20AQ9NP66 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
HMG20AQ9NP66 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20AQ9NP66 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20AQ9NP66 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.47■□□□□ 0.55
HMG20AQ9NP66 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20AQ9NP66 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.46■□□□□ 0.55
HMG20AQ9NP66 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMG20AQ9NP66 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.46■□□□□ 0.55
HMG20AQ9NP66 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HMG20AQ9NP66 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMG20AQ9NP66 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMG20AQ9NP66 SRD5A1P1-201ENST00000442297 786 ntBASIC18.46■□□□□ 0.55
HMG20AQ9NP66 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.46■□□□□ 0.55
HMG20AQ9NP66 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMG20AQ9NP66 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.46■□□□□ 0.55
HMG20AQ9NP66 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMG20AQ9NP66 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMG20AQ9NP66 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMG20AQ9NP66 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMG20AQ9NP66 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMG20AQ9NP66 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.46■□□□□ 0.55
HMG20AQ9NP66 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.46■□□□□ 0.55
HMG20AQ9NP66 AC007225.1-201ENST00000566331 1836 ntBASIC18.46■□□□□ 0.55
HMG20AQ9NP66 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.46■□□□□ 0.55
HMG20AQ9NP66 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMG20AQ9NP66 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.54
HMG20AQ9NP66 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
HMG20AQ9NP66 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
HMG20AQ9NP66 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
HMG20AQ9NP66 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.45■□□□□ 0.54
HMG20AQ9NP66 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMG20AQ9NP66 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HMG20AQ9NP66 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
HMG20AQ9NP66 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
HMG20AQ9NP66 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.45■□□□□ 0.54
HMG20AQ9NP66 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMG20AQ9NP66 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HMG20AQ9NP66 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.45■□□□□ 0.54
HMG20AQ9NP66 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.45■□□□□ 0.54
HMG20AQ9NP66 AL512631.2-201ENST00000604634 923 ntBASIC18.45■□□□□ 0.54
HMG20AQ9NP66 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMG20AQ9NP66 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
HMG20AQ9NP66 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.45■□□□□ 0.54
HMG20AQ9NP66 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HMG20AQ9NP66 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMG20AQ9NP66 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.45■□□□□ 0.54
HMG20AQ9NP66 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.45■□□□□ 0.54
HMG20AQ9NP66 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HMG20AQ9NP66 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.45■□□□□ 0.54
HMG20AQ9NP66 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HMG20AQ9NP66 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
HMG20AQ9NP66 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMG20AQ9NP66 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMG20AQ9NP66 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms