Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLK4Q9HAZ1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.79■□□□□ 0.76
CLK4Q9HAZ1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.79■□□□□ 0.76
CLK4Q9HAZ1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLK4Q9HAZ1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLK4Q9HAZ1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLK4Q9HAZ1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLK4Q9HAZ1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLK4Q9HAZ1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.79■□□□□ 0.76
CLK4Q9HAZ1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CLK4Q9HAZ1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CLK4Q9HAZ1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CLK4Q9HAZ1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLK4Q9HAZ1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLK4Q9HAZ1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLK4Q9HAZ1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLK4Q9HAZ1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLK4Q9HAZ1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLK4Q9HAZ1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLK4Q9HAZ1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.78■□□□□ 0.76
CLK4Q9HAZ1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.78■□□□□ 0.76
CLK4Q9HAZ1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.78■□□□□ 0.76
CLK4Q9HAZ1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CLK4Q9HAZ1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.78■□□□□ 0.76
CLK4Q9HAZ1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLK4Q9HAZ1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLK4Q9HAZ1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.78■□□□□ 0.76
CLK4Q9HAZ1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLK4Q9HAZ1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.78■□□□□ 0.76
CLK4Q9HAZ1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLK4Q9HAZ1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.77■□□□□ 0.76
CLK4Q9HAZ1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.77■□□□□ 0.76
CLK4Q9HAZ1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLK4Q9HAZ1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.77■□□□□ 0.76
CLK4Q9HAZ1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLK4Q9HAZ1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLK4Q9HAZ1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
CLK4Q9HAZ1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
CLK4Q9HAZ1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.77■□□□□ 0.76
CLK4Q9HAZ1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.77■□□□□ 0.76
CLK4Q9HAZ1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CLK4Q9HAZ1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLK4Q9HAZ1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLK4Q9HAZ1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CLK4Q9HAZ1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.77■□□□□ 0.76
CLK4Q9HAZ1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.77■□□□□ 0.76
CLK4Q9HAZ1 AC011767.1-201ENST00000617410 1153 ntBASIC19.77■□□□□ 0.76
CLK4Q9HAZ1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CLK4Q9HAZ1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLK4Q9HAZ1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLK4Q9HAZ1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLK4Q9HAZ1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLK4Q9HAZ1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CLK4Q9HAZ1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
CLK4Q9HAZ1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CLK4Q9HAZ1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.77■□□□□ 0.75
CLK4Q9HAZ1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 MFSD11-216ENST00000590393 1141 ntBASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 IKBKGP1-201ENST00000612193 1073 ntBASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 AC010536.3-201ENST00000620306 533 ntBASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLK4Q9HAZ1 GABARAPL3-202ENST00000624044 1851 ntBASIC19.75■□□□□ 0.75
CLK4Q9HAZ1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
CLK4Q9HAZ1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
CLK4Q9HAZ1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.75■□□□□ 0.75
CLK4Q9HAZ1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLK4Q9HAZ1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLK4Q9HAZ1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLK4Q9HAZ1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLK4Q9HAZ1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.75■□□□□ 0.75
CLK4Q9HAZ1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.75■□□□□ 0.75
CLK4Q9HAZ1 AC245052.3-201ENST00000450182 901 ntBASIC19.75■□□□□ 0.75
CLK4Q9HAZ1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.75■□□□□ 0.75
CLK4Q9HAZ1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.75■□□□□ 0.75
CLK4Q9HAZ1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms