Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.98■□□□□ 0.63
CTHRC1Q96CG8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CTHRC1Q96CG8 KRT18P68-201ENST00000392293 1000 ntBASIC18.98■□□□□ 0.63
CTHRC1Q96CG8 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.98■□□□□ 0.63
CTHRC1Q96CG8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.98■□□□□ 0.63
CTHRC1Q96CG8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.98■□□□□ 0.63
CTHRC1Q96CG8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.98■□□□□ 0.63
CTHRC1Q96CG8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.98■□□□□ 0.63
CTHRC1Q96CG8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.98■□□□□ 0.63
CTHRC1Q96CG8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTHRC1Q96CG8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.98■□□□□ 0.63
CTHRC1Q96CG8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTHRC1Q96CG8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTHRC1Q96CG8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CTHRC1Q96CG8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CTHRC1Q96CG8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CTHRC1Q96CG8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTHRC1Q96CG8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTHRC1Q96CG8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTHRC1Q96CG8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTHRC1Q96CG8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTHRC1Q96CG8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTHRC1Q96CG8 NCF1B-203ENST00000435988 1254 ntBASIC18.97■□□□□ 0.63
CTHRC1Q96CG8 AC006970.2-201ENST00000450065 779 ntBASIC18.97■□□□□ 0.63
CTHRC1Q96CG8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.97■□□□□ 0.63
CTHRC1Q96CG8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTHRC1Q96CG8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.97■□□□□ 0.63
CTHRC1Q96CG8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTHRC1Q96CG8 AC092720.2-201ENST00000602388 1665 ntBASIC18.97■□□□□ 0.63
CTHRC1Q96CG8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTHRC1Q96CG8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTHRC1Q96CG8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CTHRC1Q96CG8 LINC01006-201ENST00000333319 2292 ntBASIC18.97■□□□□ 0.63
CTHRC1Q96CG8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTHRC1Q96CG8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTHRC1Q96CG8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTHRC1Q96CG8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.96■□□□□ 0.63
CTHRC1Q96CG8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CTHRC1Q96CG8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CTHRC1Q96CG8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTHRC1Q96CG8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTHRC1Q96CG8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CTHRC1Q96CG8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
CTHRC1Q96CG8 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTHRC1Q96CG8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTHRC1Q96CG8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTHRC1Q96CG8 AL355472.2-201ENST00000422958 438 ntBASIC18.96■□□□□ 0.63
CTHRC1Q96CG8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CTHRC1Q96CG8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTHRC1Q96CG8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.96■□□□□ 0.63
CTHRC1Q96CG8 AC105036.2-201ENST00000569468 176 ntBASIC18.96■□□□□ 0.63
CTHRC1Q96CG8 AL121832.2-201ENST00000610979 668 ntBASIC18.96■□□□□ 0.63
CTHRC1Q96CG8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.96■□□□□ 0.63
CTHRC1Q96CG8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CTHRC1Q96CG8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.96■□□□□ 0.63
CTHRC1Q96CG8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTHRC1Q96CG8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CTHRC1Q96CG8 LINC01521-201ENST00000504184 1943 ntBASIC18.96■□□□□ 0.63
CTHRC1Q96CG8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 AC083906.2-201ENST00000511578 360 ntBASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 AC105020.6-201ENST00000621523 1217 ntBASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CTHRC1Q96CG8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTHRC1Q96CG8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTHRC1Q96CG8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTHRC1Q96CG8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTHRC1Q96CG8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.94■□□□□ 0.62
CTHRC1Q96CG8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTHRC1Q96CG8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTHRC1Q96CG8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.94■□□□□ 0.62
CTHRC1Q96CG8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
CTHRC1Q96CG8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.94■□□□□ 0.62
CTHRC1Q96CG8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTHRC1Q96CG8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTHRC1Q96CG8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTHRC1Q96CG8 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTHRC1Q96CG8 MKRN4P-201ENST00000444706 1521 ntBASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms