Protein–RNA interactions for Protein: Q92772

CDKL2, Cyclin-dependent kinase-like 2, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2Q92772 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.58■□□□□ 0.89
CDKL2Q92772 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.58■□□□□ 0.89
CDKL2Q92772 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDKL2Q92772 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.58■□□□□ 0.89
CDKL2Q92772 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CDKL2Q92772 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.58■□□□□ 0.88
CDKL2Q92772 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDKL2Q92772 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDKL2Q92772 AL121603.2-201ENST00000557373 2117 ntBASIC20.57■□□□□ 0.88
CDKL2Q92772 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL2Q92772 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL2Q92772 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL2Q92772 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL2Q92772 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.57■□□□□ 0.88
CDKL2Q92772 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL2Q92772 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL2Q92772 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL2Q92772 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.57■□□□□ 0.88
CDKL2Q92772 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL2Q92772 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL2Q92772 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL2Q92772 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
CDKL2Q92772 DUX4L2-201ENST00000561772 1275 ntBASIC20.57■□□□□ 0.88
CDKL2Q92772 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.57■□□□□ 0.88
CDKL2Q92772 DUX4L6-201ENST00000626483 1275 ntBASIC20.57■□□□□ 0.88
CDKL2Q92772 DUX4L1-201ENST00000627662 1275 ntBASIC20.57■□□□□ 0.88
CDKL2Q92772 DUX4L8-201ENST00000629013 1275 ntBASIC20.57■□□□□ 0.88
CDKL2Q92772 DUX4L3-201ENST00000630187 1275 ntBASIC20.57■□□□□ 0.88
CDKL2Q92772 DUX4L7-201ENST00000630678 1275 ntBASIC20.57■□□□□ 0.88
CDKL2Q92772 DUX4L5-201ENST00000630834 1275 ntBASIC20.57■□□□□ 0.88
CDKL2Q92772 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.57■□□□□ 0.88
CDKL2Q92772 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.57■□□□□ 0.88
CDKL2Q92772 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL2Q92772 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL2Q92772 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CDKL2Q92772 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL2Q92772 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL2Q92772 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL2Q92772 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL2Q92772 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL2Q92772 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL2Q92772 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL2Q92772 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL2Q92772 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL2Q92772 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL2Q92772 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.56■□□□□ 0.88
CDKL2Q92772 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.56■□□□□ 0.88
CDKL2Q92772 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL2Q92772 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CDKL2Q92772 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL2Q92772 AC099778.1-201ENST00000568593 1911 ntBASIC20.56■□□□□ 0.88
CDKL2Q92772 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL2Q92772 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CDKL2Q92772 LINC02228-203ENST00000641970 1355 ntBASIC20.56■□□□□ 0.88
CDKL2Q92772 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL2Q92772 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL2Q92772 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL2Q92772 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL2Q92772 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.55■□□□□ 0.88
CDKL2Q92772 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CDKL2Q92772 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.55■□□□□ 0.88
CDKL2Q92772 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL2Q92772 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL2Q92772 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL2Q92772 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL2Q92772 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL2Q92772 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL2Q92772 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL2Q92772 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.55■□□□□ 0.88
CDKL2Q92772 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.55■□□□□ 0.88
CDKL2Q92772 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
CDKL2Q92772 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.55■□□□□ 0.88
CDKL2Q92772 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CDKL2Q92772 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL2Q92772 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL2Q92772 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL2Q92772 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.55■□□□□ 0.88
CDKL2Q92772 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CDKL2Q92772 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CDKL2Q92772 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL2Q92772 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.55■□□□□ 0.88
CDKL2Q92772 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL2Q92772 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL2Q92772 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.54■□□□□ 0.88
CDKL2Q92772 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CDKL2Q92772 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.54■□□□□ 0.88
CDKL2Q92772 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.54■□□□□ 0.88
CDKL2Q92772 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CDKL2Q92772 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL2Q92772 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.54■□□□□ 0.88
CDKL2Q92772 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.54■□□□□ 0.88
CDKL2Q92772 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL2Q92772 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL2Q92772 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL2Q92772 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL2Q92772 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL2Q92772 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CDKL2Q92772 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.53■□□□□ 0.88
CDKL2Q92772 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.53■□□□□ 0.88
CDKL2Q92772 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms