Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CNOT9Q92600 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CNOT9Q92600 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CNOT9Q92600 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CNOT9Q92600 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CNOT9Q92600 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CNOT9Q92600 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNOT9Q92600 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNOT9Q92600 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
CNOT9Q92600 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNOT9Q92600 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CNOT9Q92600 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.79■□□□□ 0.6
CNOT9Q92600 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CNOT9Q92600 TERF1P5-201ENST00000477545 1207 ntBASIC18.79■□□□□ 0.6
CNOT9Q92600 AL162430.1-201ENST00000480705 870 ntBASIC18.79■□□□□ 0.6
CNOT9Q92600 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CNOT9Q92600 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CNOT9Q92600 MIR2861-201ENST00000636310 90 ntBASIC18.79■□□□□ 0.6
CNOT9Q92600 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNOT9Q92600 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNOT9Q92600 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNOT9Q92600 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNOT9Q92600 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.79■□□□□ 0.6
CNOT9Q92600 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNOT9Q92600 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.79■□□□□ 0.6
CNOT9Q92600 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNOT9Q92600 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT9Q92600 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT9Q92600 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT9Q92600 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT9Q92600 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT9Q92600 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CNOT9Q92600 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.78■□□□□ 0.6
CNOT9Q92600 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT9Q92600 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT9Q92600 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT9Q92600 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT9Q92600 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CNOT9Q92600 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT9Q92600 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.78■□□□□ 0.6
CNOT9Q92600 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT9Q92600 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT9Q92600 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
CNOT9Q92600 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT9Q92600 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT9Q92600 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.78■□□□□ 0.6
CNOT9Q92600 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.78■□□□□ 0.6
CNOT9Q92600 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT9Q92600 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.77■□□□□ 0.6
CNOT9Q92600 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT9Q92600 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT9Q92600 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CNOT9Q92600 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT9Q92600 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT9Q92600 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT9Q92600 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT9Q92600 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT9Q92600 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.77■□□□□ 0.6
CNOT9Q92600 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CNOT9Q92600 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT9Q92600 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.77■□□□□ 0.6
CNOT9Q92600 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CNOT9Q92600 KRT18P11-201ENST00000435214 1283 ntBASIC18.77■□□□□ 0.6
CNOT9Q92600 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CNOT9Q92600 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CNOT9Q92600 MIR5787-201ENST00000611784 55 ntBASIC18.77■□□□□ 0.6
CNOT9Q92600 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.77■□□□□ 0.6
CNOT9Q92600 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.77■□□□□ 0.6
CNOT9Q92600 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT9Q92600 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT9Q92600 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.77■□□□□ 0.6
CNOT9Q92600 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.76■□□□□ 0.59
CNOT9Q92600 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
CNOT9Q92600 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT9Q92600 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT9Q92600 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT9Q92600 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CNOT9Q92600 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT9Q92600 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.76■□□□□ 0.59
CNOT9Q92600 AC016769.1-201ENST00000409132 1010 ntBASIC18.76■□□□□ 0.59
CNOT9Q92600 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.76■□□□□ 0.59
CNOT9Q92600 MFSD11-216ENST00000590393 1141 ntBASIC18.76■□□□□ 0.59
CNOT9Q92600 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.76■□□□□ 0.59
CNOT9Q92600 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.76■□□□□ 0.59
CNOT9Q92600 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT9Q92600 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CNOT9Q92600 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT9Q92600 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT9Q92600 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CNOT9Q92600 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT9Q92600 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT9Q92600 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT9Q92600 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT9Q92600 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CNOT9Q92600 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.75■□□□□ 0.59
CNOT9Q92600 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CNOT9Q92600 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT9Q92600 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
CNOT9Q92600 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT9Q92600 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms