Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
RTL9Q8NET4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RTL9Q8NET4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RTL9Q8NET4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
RTL9Q8NET4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RTL9Q8NET4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RTL9Q8NET4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC25.25■■□□□ 1.63
RTL9Q8NET4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.25■■□□□ 1.63
RTL9Q8NET4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
RTL9Q8NET4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
RTL9Q8NET4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
RTL9Q8NET4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RTL9Q8NET4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
RTL9Q8NET4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RTL9Q8NET4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.25■■□□□ 1.63
RTL9Q8NET4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RTL9Q8NET4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RTL9Q8NET4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC25.24■■□□□ 1.63
RTL9Q8NET4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RTL9Q8NET4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC25.24■■□□□ 1.63
RTL9Q8NET4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC25.24■■□□□ 1.63
RTL9Q8NET4 MIR4497-201ENST00000583208 89 ntBASIC25.24■■□□□ 1.63
RTL9Q8NET4 Z99916.2-201ENST00000604037 246 ntBASIC25.24■■□□□ 1.63
RTL9Q8NET4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
RTL9Q8NET4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RTL9Q8NET4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RTL9Q8NET4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RTL9Q8NET4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
RTL9Q8NET4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RTL9Q8NET4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RTL9Q8NET4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
RTL9Q8NET4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC25.23■■□□□ 1.63
RTL9Q8NET4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC25.23■■□□□ 1.63
RTL9Q8NET4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC25.23■■□□□ 1.63
RTL9Q8NET4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RTL9Q8NET4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC25.23■■□□□ 1.63
RTL9Q8NET4 MTDHP1-201ENST00000605323 784 ntBASIC25.23■■□□□ 1.63
RTL9Q8NET4 MIR2861-201ENST00000636310 90 ntBASIC25.23■■□□□ 1.63
RTL9Q8NET4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
RTL9Q8NET4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
RTL9Q8NET4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RTL9Q8NET4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
RTL9Q8NET4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RTL9Q8NET4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RTL9Q8NET4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RTL9Q8NET4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
RTL9Q8NET4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
RTL9Q8NET4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
RTL9Q8NET4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC25.22■■□□□ 1.63
RTL9Q8NET4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
RTL9Q8NET4 ABHD17AP6-201ENST00000458502 1044 ntBASIC25.22■■□□□ 1.63
RTL9Q8NET4 KRT8P36-201ENST00000489121 1440 ntBASIC25.22■■□□□ 1.63
RTL9Q8NET4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
RTL9Q8NET4 FAM197Y4-202ENST00000622692 608 ntBASIC25.22■■□□□ 1.63
RTL9Q8NET4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RTL9Q8NET4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RTL9Q8NET4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC25.22■■□□□ 1.63
RTL9Q8NET4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC25.22■■□□□ 1.63
RTL9Q8NET4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RTL9Q8NET4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
RTL9Q8NET4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
RTL9Q8NET4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RTL9Q8NET4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC25.21■■□□□ 1.63
RTL9Q8NET4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
RTL9Q8NET4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RTL9Q8NET4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
RTL9Q8NET4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC25.21■■□□□ 1.63
RTL9Q8NET4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RTL9Q8NET4 AC120498.8-201ENST00000614275 531 ntBASIC25.21■■□□□ 1.63
RTL9Q8NET4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RTL9Q8NET4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
RTL9Q8NET4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RTL9Q8NET4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC25.21■■□□□ 1.63
RTL9Q8NET4 MIR718-201ENST00000390190 70 ntBASIC25.2■■□□□ 1.63
RTL9Q8NET4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC25.2■■□□□ 1.63
RTL9Q8NET4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC25.2■■□□□ 1.63
RTL9Q8NET4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC25.2■■□□□ 1.63
RTL9Q8NET4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC25.2■■□□□ 1.63
RTL9Q8NET4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
RTL9Q8NET4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC25.2■■□□□ 1.62
RTL9Q8NET4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
RTL9Q8NET4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC25.2■■□□□ 1.62
RTL9Q8NET4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC25.2■■□□□ 1.62
RTL9Q8NET4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
RTL9Q8NET4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
RTL9Q8NET4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
RTL9Q8NET4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC25.2■■□□□ 1.62
RTL9Q8NET4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RTL9Q8NET4 AL049796.1-201ENST00000565336 1766 ntBASIC25.2■■□□□ 1.62
RTL9Q8NET4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RTL9Q8NET4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC25.19■■□□□ 1.62
RTL9Q8NET4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RTL9Q8NET4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RTL9Q8NET4 RER1-204ENST00000378518 522 ntTSL 3 BASIC25.19■■□□□ 1.62
RTL9Q8NET4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC25.19■■□□□ 1.62
RTL9Q8NET4 AC133681.1-201ENST00000465482 601 ntBASIC25.19■■□□□ 1.62
RTL9Q8NET4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC25.19■■□□□ 1.62
RTL9Q8NET4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC25.19■■□□□ 1.62
RTL9Q8NET4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RTL9Q8NET4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms