Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPEB3Q8NE35 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.85■□□□□ 0.45
CPEB3Q8NE35 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPEB3Q8NE35 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
CPEB3Q8NE35 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPEB3Q8NE35 CYP2T1P-201ENST00000432607 1285 ntBASIC17.85■□□□□ 0.45
CPEB3Q8NE35 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.85■□□□□ 0.45
CPEB3Q8NE35 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPEB3Q8NE35 RARRES2P4-201ENST00000514074 484 ntBASIC17.85■□□□□ 0.45
CPEB3Q8NE35 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPEB3Q8NE35 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.85■□□□□ 0.45
CPEB3Q8NE35 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPEB3Q8NE35 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CPEB3Q8NE35 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPEB3Q8NE35 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPEB3Q8NE35 AL121603.2-201ENST00000557373 2117 ntBASIC17.84■□□□□ 0.45
CPEB3Q8NE35 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPEB3Q8NE35 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CPEB3Q8NE35 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPEB3Q8NE35 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.84■□□□□ 0.45
CPEB3Q8NE35 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPEB3Q8NE35 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPEB3Q8NE35 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.84■□□□□ 0.45
CPEB3Q8NE35 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPEB3Q8NE35 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CPEB3Q8NE35 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CPEB3Q8NE35 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPEB3Q8NE35 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.84■□□□□ 0.45
CPEB3Q8NE35 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.84■□□□□ 0.45
CPEB3Q8NE35 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CPEB3Q8NE35 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.84■□□□□ 0.45
CPEB3Q8NE35 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPEB3Q8NE35 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.84■□□□□ 0.45
CPEB3Q8NE35 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPEB3Q8NE35 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.84■□□□□ 0.45
CPEB3Q8NE35 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPEB3Q8NE35 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPEB3Q8NE35 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPEB3Q8NE35 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CPEB3Q8NE35 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPEB3Q8NE35 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CPEB3Q8NE35 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
CPEB3Q8NE35 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.83■□□□□ 0.45
CPEB3Q8NE35 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CPEB3Q8NE35 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CPEB3Q8NE35 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CPEB3Q8NE35 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CPEB3Q8NE35 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CPEB3Q8NE35 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.83■□□□□ 0.45
CPEB3Q8NE35 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CPEB3Q8NE35 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.83■□□□□ 0.44
CPEB3Q8NE35 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CPEB3Q8NE35 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.83■□□□□ 0.44
CPEB3Q8NE35 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.83■□□□□ 0.44
CPEB3Q8NE35 CROCCP5-201ENST00000436658 830 ntBASIC17.83■□□□□ 0.44
CPEB3Q8NE35 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.83■□□□□ 0.44
CPEB3Q8NE35 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CPEB3Q8NE35 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.83■□□□□ 0.44
CPEB3Q8NE35 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CPEB3Q8NE35 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CPEB3Q8NE35 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 AC069236.1-201ENST00000604339 616 ntBASIC17.82■□□□□ 0.44
CPEB3Q8NE35 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 AL050303.2-201ENST00000619798 666 ntBASIC17.82■□□□□ 0.44
CPEB3Q8NE35 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 MIR2861-201ENST00000636310 90 ntBASIC17.82■□□□□ 0.44
CPEB3Q8NE35 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 AL157384.1-201ENST00000445995 2473 ntBASIC17.82■□□□□ 0.44
CPEB3Q8NE35 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
CPEB3Q8NE35 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPEB3Q8NE35 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.81■□□□□ 0.44
CPEB3Q8NE35 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPEB3Q8NE35 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPEB3Q8NE35 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPEB3Q8NE35 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPEB3Q8NE35 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPEB3Q8NE35 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPEB3Q8NE35 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms