Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC38A9Q8NBW4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC38A9Q8NBW4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC38A9Q8NBW4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC38A9Q8NBW4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC38A9Q8NBW4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC38A9Q8NBW4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC38A9Q8NBW4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SLC38A9Q8NBW4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC38A9Q8NBW4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.3■□□□□ 0.68
SLC38A9Q8NBW4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC38A9Q8NBW4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SLC38A9Q8NBW4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SLC38A9Q8NBW4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC38A9Q8NBW4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC38A9Q8NBW4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC38A9Q8NBW4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC38A9Q8NBW4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SLC38A9Q8NBW4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC38A9Q8NBW4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC38A9Q8NBW4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC38A9Q8NBW4 PGM5P4-201ENST00000421970 445 ntBASIC19.29■□□□□ 0.68
SLC38A9Q8NBW4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC38A9Q8NBW4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.29■□□□□ 0.68
SLC38A9Q8NBW4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC38A9Q8NBW4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SLC38A9Q8NBW4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC38A9Q8NBW4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC38A9Q8NBW4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC38A9Q8NBW4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC38A9Q8NBW4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC38A9Q8NBW4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC38A9Q8NBW4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC38A9Q8NBW4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SLC38A9Q8NBW4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC38A9Q8NBW4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC38A9Q8NBW4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC38A9Q8NBW4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC38A9Q8NBW4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.28■□□□□ 0.68
SLC38A9Q8NBW4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC38A9Q8NBW4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.28■□□□□ 0.68
SLC38A9Q8NBW4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC38A9Q8NBW4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC38A9Q8NBW4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC38A9Q8NBW4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC38A9Q8NBW4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC38A9Q8NBW4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC38A9Q8NBW4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC38A9Q8NBW4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SLC38A9Q8NBW4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC38A9Q8NBW4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC38A9Q8NBW4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC38A9Q8NBW4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC38A9Q8NBW4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SLC38A9Q8NBW4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC38A9Q8NBW4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC38A9Q8NBW4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC38A9Q8NBW4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC38A9Q8NBW4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC38A9Q8NBW4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SLC38A9Q8NBW4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.27■□□□□ 0.68
SLC38A9Q8NBW4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC38A9Q8NBW4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC38A9Q8NBW4 KRT17P3-201ENST00000420566 1262 ntBASIC19.27■□□□□ 0.68
SLC38A9Q8NBW4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.27■□□□□ 0.68
SLC38A9Q8NBW4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.27■□□□□ 0.68
SLC38A9Q8NBW4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC38A9Q8NBW4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.27■□□□□ 0.68
SLC38A9Q8NBW4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC38A9Q8NBW4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
SLC38A9Q8NBW4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.27■□□□□ 0.68
SLC38A9Q8NBW4 AL359736.2-201ENST00000621992 437 ntBASIC19.27■□□□□ 0.68
SLC38A9Q8NBW4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC38A9Q8NBW4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SLC38A9Q8NBW4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC38A9Q8NBW4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC38A9Q8NBW4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
SLC38A9Q8NBW4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC38A9Q8NBW4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC38A9Q8NBW4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC38A9Q8NBW4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC38A9Q8NBW4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC38A9Q8NBW4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC38A9Q8NBW4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
SLC38A9Q8NBW4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC38A9Q8NBW4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC38A9Q8NBW4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC38A9Q8NBW4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.26■□□□□ 0.67
SLC38A9Q8NBW4 AP006294.2-201ENST00000641667 209 ntBASIC19.26■□□□□ 0.67
SLC38A9Q8NBW4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC38A9Q8NBW4 AL049796.1-201ENST00000565336 1766 ntBASIC19.26■□□□□ 0.67
SLC38A9Q8NBW4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC38A9Q8NBW4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SLC38A9Q8NBW4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC38A9Q8NBW4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC38A9Q8NBW4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC38A9Q8NBW4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC38A9Q8NBW4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC38A9Q8NBW4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC38A9Q8NBW4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms