Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.7■□□□□ 0.74
LINC01555Q8NAE3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
LINC01555Q8NAE3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC01555Q8NAE3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC01555Q8NAE3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC01555Q8NAE3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LINC01555Q8NAE3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LINC01555Q8NAE3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC01555Q8NAE3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.69■□□□□ 0.74
LINC01555Q8NAE3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC01555Q8NAE3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC01555Q8NAE3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LINC01555Q8NAE3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.69■□□□□ 0.74
LINC01555Q8NAE3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
LINC01555Q8NAE3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.69■□□□□ 0.74
LINC01555Q8NAE3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.69■□□□□ 0.74
LINC01555Q8NAE3 MYC-209ENST00000641252 345 ntBASIC19.69■□□□□ 0.74
LINC01555Q8NAE3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
LINC01555Q8NAE3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC01555Q8NAE3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC01555Q8NAE3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC01555Q8NAE3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LINC01555Q8NAE3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LINC01555Q8NAE3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LINC01555Q8NAE3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
LINC01555Q8NAE3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC01555Q8NAE3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC01555Q8NAE3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LINC01555Q8NAE3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.68■□□□□ 0.74
LINC01555Q8NAE3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC01555Q8NAE3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.68■□□□□ 0.74
LINC01555Q8NAE3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
LINC01555Q8NAE3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LINC01555Q8NAE3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC01555Q8NAE3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC01555Q8NAE3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
LINC01555Q8NAE3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LINC01555Q8NAE3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
LINC01555Q8NAE3 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.68■□□□□ 0.74
LINC01555Q8NAE3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.68■□□□□ 0.74
LINC01555Q8NAE3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.68■□□□□ 0.74
LINC01555Q8NAE3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.68■□□□□ 0.74
LINC01555Q8NAE3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.68■□□□□ 0.74
LINC01555Q8NAE3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC01555Q8NAE3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC01555Q8NAE3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC01555Q8NAE3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.68■□□□□ 0.74
LINC01555Q8NAE3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC01555Q8NAE3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC01555Q8NAE3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.67■□□□□ 0.74
LINC01555Q8NAE3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LINC01555Q8NAE3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
LINC01555Q8NAE3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC01555Q8NAE3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC01555Q8NAE3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC01555Q8NAE3 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.67■□□□□ 0.74
LINC01555Q8NAE3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.67■□□□□ 0.74
LINC01555Q8NAE3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.67■□□□□ 0.74
LINC01555Q8NAE3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LINC01555Q8NAE3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.67■□□□□ 0.74
LINC01555Q8NAE3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LINC01555Q8NAE3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC01555Q8NAE3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC01555Q8NAE3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC01555Q8NAE3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC01555Q8NAE3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.67■□□□□ 0.74
LINC01555Q8NAE3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LINC01555Q8NAE3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC01555Q8NAE3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LINC01555Q8NAE3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC01555Q8NAE3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LINC01555Q8NAE3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC01555Q8NAE3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.66■□□□□ 0.74
LINC01555Q8NAE3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LINC01555Q8NAE3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
LINC01555Q8NAE3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LINC01555Q8NAE3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
LINC01555Q8NAE3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.66■□□□□ 0.74
LINC01555Q8NAE3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LINC01555Q8NAE3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.66■□□□□ 0.74
LINC01555Q8NAE3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.66■□□□□ 0.74
LINC01555Q8NAE3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.66■□□□□ 0.74
LINC01555Q8NAE3 AC083880.1-201ENST00000608266 535 ntBASIC19.66■□□□□ 0.74
LINC01555Q8NAE3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.66■□□□□ 0.74
LINC01555Q8NAE3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LINC01555Q8NAE3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.66■□□□□ 0.74
LINC01555Q8NAE3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LINC01555Q8NAE3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LINC01555Q8NAE3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LINC01555Q8NAE3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LINC01555Q8NAE3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINC01555Q8NAE3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LINC01555Q8NAE3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.65■□□□□ 0.74
LINC01555Q8NAE3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINC01555Q8NAE3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.65■□□□□ 0.74
LINC01555Q8NAE3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINC01555Q8NAE3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.65■□□□□ 0.74
LINC01555Q8NAE3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINC01555Q8NAE3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINC01555Q8NAE3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms