Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SCUBE3Q8IX30 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCUBE3Q8IX30 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCUBE3Q8IX30 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.48■■□□□ 1.03
SCUBE3Q8IX30 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SCUBE3Q8IX30 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.48■■□□□ 1.03
SCUBE3Q8IX30 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCUBE3Q8IX30 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SCUBE3Q8IX30 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SCUBE3Q8IX30 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SCUBE3Q8IX30 GUSBP6-202ENST00000438529 1198 ntBASIC21.48■■□□□ 1.03
SCUBE3Q8IX30 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.48■■□□□ 1.03
SCUBE3Q8IX30 TSPY6P-201ENST00000448518 926 ntBASIC21.48■■□□□ 1.03
SCUBE3Q8IX30 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.48■■□□□ 1.03
SCUBE3Q8IX30 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.48■■□□□ 1.03
SCUBE3Q8IX30 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCUBE3Q8IX30 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SCUBE3Q8IX30 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.48■■□□□ 1.03
SCUBE3Q8IX30 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCUBE3Q8IX30 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
SCUBE3Q8IX30 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCUBE3Q8IX30 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.47■■□□□ 1.03
SCUBE3Q8IX30 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.47■■□□□ 1.03
SCUBE3Q8IX30 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SCUBE3Q8IX30 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCUBE3Q8IX30 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
SCUBE3Q8IX30 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
SCUBE3Q8IX30 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCUBE3Q8IX30 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SCUBE3Q8IX30 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCUBE3Q8IX30 KRT18P68-201ENST00000392293 1000 ntBASIC21.47■■□□□ 1.03
SCUBE3Q8IX30 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.47■■□□□ 1.03
SCUBE3Q8IX30 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SCUBE3Q8IX30 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SCUBE3Q8IX30 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.47■■□□□ 1.03
SCUBE3Q8IX30 CYP2T3P-201ENST00000601990 817 ntBASIC21.47■■□□□ 1.03
SCUBE3Q8IX30 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.47■■□□□ 1.03
SCUBE3Q8IX30 AL109923.1-201ENST00000618799 583 ntBASIC21.47■■□□□ 1.03
SCUBE3Q8IX30 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SCUBE3Q8IX30 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCUBE3Q8IX30 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCUBE3Q8IX30 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SCUBE3Q8IX30 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.47■■□□□ 1.03
SCUBE3Q8IX30 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SCUBE3Q8IX30 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCUBE3Q8IX30 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.46■■□□□ 1.03
SCUBE3Q8IX30 AC087633.2-202ENST00000565166 1439 ntBASIC21.46■■□□□ 1.03
SCUBE3Q8IX30 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SCUBE3Q8IX30 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
SCUBE3Q8IX30 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.46■■□□□ 1.03
SCUBE3Q8IX30 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCUBE3Q8IX30 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.46■■□□□ 1.03
SCUBE3Q8IX30 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCUBE3Q8IX30 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
SCUBE3Q8IX30 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCUBE3Q8IX30 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.46■■□□□ 1.03
SCUBE3Q8IX30 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
SCUBE3Q8IX30 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.46■■□□□ 1.03
SCUBE3Q8IX30 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCUBE3Q8IX30 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SCUBE3Q8IX30 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.45■■□□□ 1.02
SCUBE3Q8IX30 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCUBE3Q8IX30 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SCUBE3Q8IX30 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.45■■□□□ 1.02
SCUBE3Q8IX30 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCUBE3Q8IX30 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCUBE3Q8IX30 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.45■■□□□ 1.02
SCUBE3Q8IX30 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCUBE3Q8IX30 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
SCUBE3Q8IX30 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCUBE3Q8IX30 BX276092.2-201ENST00000417668 665 ntBASIC21.45■■□□□ 1.02
SCUBE3Q8IX30 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.45■■□□□ 1.02
SCUBE3Q8IX30 AC104771.1-201ENST00000603335 964 ntBASIC21.45■■□□□ 1.02
SCUBE3Q8IX30 TMEM191A-211ENST00000637163 1067 ntBASIC21.45■■□□□ 1.02
SCUBE3Q8IX30 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCUBE3Q8IX30 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
SCUBE3Q8IX30 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.45■■□□□ 1.02
SCUBE3Q8IX30 AL157384.1-201ENST00000445995 2473 ntBASIC21.45■■□□□ 1.02
SCUBE3Q8IX30 KRT17P1-201ENST00000399211 1546 ntBASIC21.45■■□□□ 1.02
SCUBE3Q8IX30 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SCUBE3Q8IX30 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCUBE3Q8IX30 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SCUBE3Q8IX30 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.44■■□□□ 1.02
SCUBE3Q8IX30 MIPEPP3-201ENST00000412105 444 ntBASIC21.44■■□□□ 1.02
SCUBE3Q8IX30 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.44■■□□□ 1.02
SCUBE3Q8IX30 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.44■■□□□ 1.02
SCUBE3Q8IX30 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.44■■□□□ 1.02
SCUBE3Q8IX30 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
SCUBE3Q8IX30 AL356652.1-201ENST00000615962 565 ntBASIC21.44■■□□□ 1.02
SCUBE3Q8IX30 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCUBE3Q8IX30 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCUBE3Q8IX30 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.44■■□□□ 1.02
SCUBE3Q8IX30 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCUBE3Q8IX30 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCUBE3Q8IX30 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
SCUBE3Q8IX30 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCUBE3Q8IX30 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SCUBE3Q8IX30 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SCUBE3Q8IX30 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCUBE3Q8IX30 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms