Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
LRRC28Q86X40 AL512408.1-201ENST00000569378 2000 ntBASIC18.1■□□□□ 0.49
LRRC28Q86X40 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LRRC28Q86X40 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.1■□□□□ 0.49
LRRC28Q86X40 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC28Q86X40 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC28Q86X40 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
LRRC28Q86X40 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LRRC28Q86X40 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC28Q86X40 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.1■□□□□ 0.49
LRRC28Q86X40 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC28Q86X40 KRT18P14-201ENST00000534205 1250 ntBASIC18.1■□□□□ 0.49
LRRC28Q86X40 DUX4L2-201ENST00000561772 1275 ntBASIC18.1■□□□□ 0.49
LRRC28Q86X40 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
LRRC28Q86X40 DUX4L6-201ENST00000626483 1275 ntBASIC18.1■□□□□ 0.49
LRRC28Q86X40 DUX4L1-201ENST00000627662 1275 ntBASIC18.1■□□□□ 0.49
LRRC28Q86X40 DUX4L8-201ENST00000629013 1275 ntBASIC18.1■□□□□ 0.49
LRRC28Q86X40 DUX4L3-201ENST00000630187 1275 ntBASIC18.1■□□□□ 0.49
LRRC28Q86X40 DUX4L7-201ENST00000630678 1275 ntBASIC18.1■□□□□ 0.49
LRRC28Q86X40 DUX4L5-201ENST00000630834 1275 ntBASIC18.1■□□□□ 0.49
LRRC28Q86X40 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC28Q86X40 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC28Q86X40 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC28Q86X40 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.1■□□□□ 0.49
LRRC28Q86X40 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC28Q86X40 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LRRC28Q86X40 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC28Q86X40 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LRRC28Q86X40 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.09■□□□□ 0.49
LRRC28Q86X40 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRC28Q86X40 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC28Q86X40 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC28Q86X40 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC28Q86X40 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
LRRC28Q86X40 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC28Q86X40 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC28Q86X40 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LRRC28Q86X40 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC28Q86X40 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC28Q86X40 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC28Q86X40 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC28Q86X40 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRC28Q86X40 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC28Q86X40 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.09■□□□□ 0.49
LRRC28Q86X40 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC28Q86X40 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC28Q86X40 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.09■□□□□ 0.49
LRRC28Q86X40 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC28Q86X40 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.09■□□□□ 0.49
LRRC28Q86X40 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC28Q86X40 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRC28Q86X40 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
LRRC28Q86X40 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC28Q86X40 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC28Q86X40 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC28Q86X40 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC28Q86X40 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC28Q86X40 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC28Q86X40 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC28Q86X40 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC28Q86X40 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.09■□□□□ 0.49
LRRC28Q86X40 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRC28Q86X40 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LRRC28Q86X40 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC28Q86X40 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.08■□□□□ 0.49
LRRC28Q86X40 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRC28Q86X40 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
LRRC28Q86X40 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRC28Q86X40 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
LRRC28Q86X40 AC099778.1-201ENST00000568593 1911 ntBASIC18.08■□□□□ 0.49
LRRC28Q86X40 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC28Q86X40 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC28Q86X40 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.08■□□□□ 0.48
LRRC28Q86X40 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.08■□□□□ 0.48
LRRC28Q86X40 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.08■□□□□ 0.48
LRRC28Q86X40 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.08■□□□□ 0.48
LRRC28Q86X40 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.08■□□□□ 0.48
LRRC28Q86X40 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC28Q86X40 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC28Q86X40 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
LRRC28Q86X40 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC28Q86X40 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.07■□□□□ 0.48
LRRC28Q86X40 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
LRRC28Q86X40 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.07■□□□□ 0.48
LRRC28Q86X40 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.07■□□□□ 0.48
LRRC28Q86X40 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC28Q86X40 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC28Q86X40 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
LRRC28Q86X40 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC28Q86X40 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC28Q86X40 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC28Q86X40 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC28Q86X40 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC28Q86X40 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC28Q86X40 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LRRC28Q86X40 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
LRRC28Q86X40 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LRRC28Q86X40 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC28Q86X40 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC28Q86X40 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms