Protein–RNA interactions for Protein: Q86WT1

TTC30A, Tetratricopeptide repeat protein 30A, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC30AQ86WT1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TTC30AQ86WT1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TTC30AQ86WT1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.65■■□□□ 1.06
TTC30AQ86WT1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TTC30AQ86WT1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.65■■□□□ 1.06
TTC30AQ86WT1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.65■■□□□ 1.06
TTC30AQ86WT1 KRT18P6-201ENST00000555540 1265 ntBASIC21.65■■□□□ 1.06
TTC30AQ86WT1 AC142086.2-201ENST00000569753 217 ntBASIC21.65■■□□□ 1.06
TTC30AQ86WT1 CYP2T3P-201ENST00000601990 817 ntBASIC21.65■■□□□ 1.06
TTC30AQ86WT1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TTC30AQ86WT1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
TTC30AQ86WT1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
TTC30AQ86WT1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TTC30AQ86WT1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
TTC30AQ86WT1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
TTC30AQ86WT1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
TTC30AQ86WT1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TTC30AQ86WT1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
TTC30AQ86WT1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TTC30AQ86WT1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TTC30AQ86WT1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
TTC30AQ86WT1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TTC30AQ86WT1 AC087633.2-202ENST00000565166 1439 ntBASIC21.64■■□□□ 1.06
TTC30AQ86WT1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TTC30AQ86WT1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TTC30AQ86WT1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.64■■□□□ 1.05
TTC30AQ86WT1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.64■■□□□ 1.05
TTC30AQ86WT1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.64■■□□□ 1.05
TTC30AQ86WT1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.64■■□□□ 1.05
TTC30AQ86WT1 MIR2861-201ENST00000636310 90 ntBASIC21.64■■□□□ 1.05
TTC30AQ86WT1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TTC30AQ86WT1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TTC30AQ86WT1 KRT17P1-201ENST00000399211 1546 ntBASIC21.64■■□□□ 1.05
TTC30AQ86WT1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.64■■□□□ 1.05
TTC30AQ86WT1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
TTC30AQ86WT1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.64■■□□□ 1.05
TTC30AQ86WT1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TTC30AQ86WT1 AL121603.2-201ENST00000557373 2117 ntBASIC21.64■■□□□ 1.05
TTC30AQ86WT1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
TTC30AQ86WT1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TTC30AQ86WT1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TTC30AQ86WT1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.63■■□□□ 1.05
TTC30AQ86WT1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.63■■□□□ 1.05
TTC30AQ86WT1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.63■■□□□ 1.05
TTC30AQ86WT1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.63■■□□□ 1.05
TTC30AQ86WT1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
TTC30AQ86WT1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TTC30AQ86WT1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.63■■□□□ 1.05
TTC30AQ86WT1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TTC30AQ86WT1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.63■■□□□ 1.05
TTC30AQ86WT1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
TTC30AQ86WT1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.63■■□□□ 1.05
TTC30AQ86WT1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 MIPEPP3-201ENST00000412105 444 ntBASIC21.62■■□□□ 1.05
TTC30AQ86WT1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 FP700111.2-201ENST00000619190 1892 ntBASIC21.62■■□□□ 1.05
TTC30AQ86WT1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 AC007225.1-201ENST00000566331 1836 ntBASIC21.62■■□□□ 1.05
TTC30AQ86WT1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TTC30AQ86WT1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TTC30AQ86WT1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
TTC30AQ86WT1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TTC30AQ86WT1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.61■■□□□ 1.05
TTC30AQ86WT1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TTC30AQ86WT1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TTC30AQ86WT1 BX276092.2-201ENST00000417668 665 ntBASIC21.61■■□□□ 1.05
TTC30AQ86WT1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TTC30AQ86WT1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.61■■□□□ 1.05
TTC30AQ86WT1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.61■■□□□ 1.05
TTC30AQ86WT1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TTC30AQ86WT1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TTC30AQ86WT1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TTC30AQ86WT1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TTC30AQ86WT1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
TTC30AQ86WT1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TTC30AQ86WT1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.61■■□□□ 1.05
TTC30AQ86WT1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms