Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM1Q86UE6 AL136116.3-201ENST00000402907 1138 ntBASIC17.7■□□□□ 0.42
LRRTM1Q86UE6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM1Q86UE6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.7■□□□□ 0.42
LRRTM1Q86UE6 AL136162.1-201ENST00000607711 1078 ntBASIC17.7■□□□□ 0.42
LRRTM1Q86UE6 RARRES2P11-201ENST00000635158 484 ntBASIC17.7■□□□□ 0.42
LRRTM1Q86UE6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM1Q86UE6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.7■□□□□ 0.42
LRRTM1Q86UE6 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM1Q86UE6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM1Q86UE6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM1Q86UE6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM1Q86UE6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM1Q86UE6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM1Q86UE6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM1Q86UE6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LRRTM1Q86UE6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRTM1Q86UE6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.69■□□□□ 0.42
LRRTM1Q86UE6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM1Q86UE6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRTM1Q86UE6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM1Q86UE6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM1Q86UE6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LRRTM1Q86UE6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM1Q86UE6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRTM1Q86UE6 AC008764.7-201ENST00000593779 1081 ntBASIC17.69■□□□□ 0.42
LRRTM1Q86UE6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.69■□□□□ 0.42
LRRTM1Q86UE6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM1Q86UE6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRTM1Q86UE6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
LRRTM1Q86UE6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM1Q86UE6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
LRRTM1Q86UE6 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.68■□□□□ 0.42
LRRTM1Q86UE6 AL158211.5-201ENST00000623583 2518 ntBASIC17.68■□□□□ 0.42
LRRTM1Q86UE6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM1Q86UE6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRTM1Q86UE6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRTM1Q86UE6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM1Q86UE6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM1Q86UE6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM1Q86UE6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM1Q86UE6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRTM1Q86UE6 AC099791.1-201ENST00000416440 715 ntBASIC17.68■□□□□ 0.42
LRRTM1Q86UE6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LRRTM1Q86UE6 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.68■□□□□ 0.42
LRRTM1Q86UE6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRTM1Q86UE6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRTM1Q86UE6 MIR2861-201ENST00000636310 90 ntBASIC17.68■□□□□ 0.42
LRRTM1Q86UE6 AC018445.3-201ENST00000624177 1945 ntBASIC17.68■□□□□ 0.42
LRRTM1Q86UE6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRTM1Q86UE6 BX323043.1-201ENST00000641006 1765 ntBASIC17.68■□□□□ 0.42
LRRTM1Q86UE6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM1Q86UE6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRTM1Q86UE6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRTM1Q86UE6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 AL020996.1-203ENST00000536896 2307 ntBASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM1Q86UE6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms