Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN20Q4JDL3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
PTPN20Q4JDL3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN20Q4JDL3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.52■■□□□ 1.04
PTPN20Q4JDL3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN20Q4JDL3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN20Q4JDL3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN20Q4JDL3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN20Q4JDL3 MIR663A-201ENST00000385250 93 ntBASIC21.52■■□□□ 1.04
PTPN20Q4JDL3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN20Q4JDL3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.52■■□□□ 1.04
PTPN20Q4JDL3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.52■■□□□ 1.04
PTPN20Q4JDL3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN20Q4JDL3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.52■■□□□ 1.04
PTPN20Q4JDL3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN20Q4JDL3 LINC01521-201ENST00000504184 1943 ntBASIC21.52■■□□□ 1.04
PTPN20Q4JDL3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PTPN20Q4JDL3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.52■■□□□ 1.04
PTPN20Q4JDL3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN20Q4JDL3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN20Q4JDL3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN20Q4JDL3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.52■■□□□ 1.04
PTPN20Q4JDL3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.52■■□□□ 1.04
PTPN20Q4JDL3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PTPN20Q4JDL3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PTPN20Q4JDL3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
PTPN20Q4JDL3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PTPN20Q4JDL3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 AC093787.1-201ENST00000450396 207 ntBASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PTPN20Q4JDL3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.5■■□□□ 1.03
PTPN20Q4JDL3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN20Q4JDL3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN20Q4JDL3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.5■■□□□ 1.03
PTPN20Q4JDL3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN20Q4JDL3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.5■■□□□ 1.03
PTPN20Q4JDL3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PTPN20Q4JDL3 AC100791.3-201ENST00000617619 330 ntBASIC21.5■■□□□ 1.03
PTPN20Q4JDL3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN20Q4JDL3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN20Q4JDL3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN20Q4JDL3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN20Q4JDL3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN20Q4JDL3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN20Q4JDL3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.5■■□□□ 1.03
PTPN20Q4JDL3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.5■■□□□ 1.03
PTPN20Q4JDL3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.5■■□□□ 1.03
PTPN20Q4JDL3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN20Q4JDL3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN20Q4JDL3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN20Q4JDL3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN20Q4JDL3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.49■■□□□ 1.03
PTPN20Q4JDL3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN20Q4JDL3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
PTPN20Q4JDL3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN20Q4JDL3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN20Q4JDL3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN20Q4JDL3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.49■■□□□ 1.03
PTPN20Q4JDL3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.49■■□□□ 1.03
PTPN20Q4JDL3 OR10C1-204ENST00000622521 1039 ntBASIC21.49■■□□□ 1.03
PTPN20Q4JDL3 AC008694.1-202ENST00000636953 945 ntBASIC21.49■■□□□ 1.03
PTPN20Q4JDL3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN20Q4JDL3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN20Q4JDL3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.49■■□□□ 1.03
PTPN20Q4JDL3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.49■■□□□ 1.03
PTPN20Q4JDL3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN20Q4JDL3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.48■■□□□ 1.03
PTPN20Q4JDL3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN20Q4JDL3 AC092720.2-201ENST00000602388 1665 ntBASIC21.48■■□□□ 1.03
PTPN20Q4JDL3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN20Q4JDL3 MCRIP2P1-201ENST00000394346 511 ntBASIC21.48■■□□□ 1.03
PTPN20Q4JDL3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.48■■□□□ 1.03
PTPN20Q4JDL3 AL356652.1-201ENST00000615962 565 ntBASIC21.48■■□□□ 1.03
PTPN20Q4JDL3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.48■■□□□ 1.03
PTPN20Q4JDL3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.48■■□□□ 1.03
PTPN20Q4JDL3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms