Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RPS3AP61247 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.04■□□□□ 0.64
RPS3AP61247 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPS3AP61247 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.04■□□□□ 0.64
RPS3AP61247 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RPS3AP61247 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPS3AP61247 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPS3AP61247 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPS3AP61247 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPS3AP61247 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPS3AP61247 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.03■□□□□ 0.64
RPS3AP61247 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RPS3AP61247 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPS3AP61247 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPS3AP61247 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPS3AP61247 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.03■□□□□ 0.64
RPS3AP61247 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.03■□□□□ 0.64
RPS3AP61247 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPS3AP61247 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPS3AP61247 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPS3AP61247 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RPS3AP61247 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPS3AP61247 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.03■□□□□ 0.64
RPS3AP61247 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPS3AP61247 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.03■□□□□ 0.64
RPS3AP61247 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPS3AP61247 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.03■□□□□ 0.64
RPS3AP61247 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPS3AP61247 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPS3AP61247 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPS3AP61247 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPS3AP61247 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.02■□□□□ 0.64
RPS3AP61247 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.02■□□□□ 0.64
RPS3AP61247 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.02■□□□□ 0.64
RPS3AP61247 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RPS3AP61247 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.02■□□□□ 0.64
RPS3AP61247 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPS3AP61247 AC008175.2-201ENST00000612840 297 ntBASIC19.02■□□□□ 0.64
RPS3AP61247 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.02■□□□□ 0.64
RPS3AP61247 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.02■□□□□ 0.64
RPS3AP61247 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
RPS3AP61247 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RPS3AP61247 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RPS3AP61247 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
RPS3AP61247 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RPS3AP61247 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RPS3AP61247 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPS3AP61247 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPS3AP61247 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPS3AP61247 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RPS3AP61247 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPS3AP61247 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPS3AP61247 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.01■□□□□ 0.63
RPS3AP61247 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPS3AP61247 AC004911.1-201ENST00000416316 871 ntBASIC19.01■□□□□ 0.63
RPS3AP61247 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.01■□□□□ 0.63
RPS3AP61247 AC010141.2-201ENST00000452426 721 ntBASIC19.01■□□□□ 0.63
RPS3AP61247 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.01■□□□□ 0.63
RPS3AP61247 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.01■□□□□ 0.63
RPS3AP61247 KRT18P20-201ENST00000548986 1279 ntBASIC19.01■□□□□ 0.63
RPS3AP61247 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.01■□□□□ 0.63
RPS3AP61247 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.01■□□□□ 0.63
RPS3AP61247 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.01■□□□□ 0.63
RPS3AP61247 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.01■□□□□ 0.63
RPS3AP61247 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.01■□□□□ 0.63
RPS3AP61247 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.01■□□□□ 0.63
RPS3AP61247 AC120498.10-201ENST00000621827 505 ntBASIC19.01■□□□□ 0.63
RPS3AP61247 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.01■□□□□ 0.63
RPS3AP61247 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPS3AP61247 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPS3AP61247 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPS3AP61247 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPS3AP61247 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPS3AP61247 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
RPS3AP61247 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPS3AP61247 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.01■□□□□ 0.63
RPS3AP61247 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.01■□□□□ 0.63
RPS3AP61247 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPS3AP61247 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RPS3AP61247 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPS3AP61247 AFG3L1P-217ENST00000557444 2447 ntBASIC19■□□□□ 0.63
RPS3AP61247 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RPS3AP61247 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RPS3AP61247 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPS3AP61247 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RPS3AP61247 AC006015.1-201ENST00000429970 570 ntBASIC19■□□□□ 0.63
RPS3AP61247 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
RPS3AP61247 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19■□□□□ 0.63
RPS3AP61247 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPS3AP61247 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
RPS3AP61247 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RPS3AP61247 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPS3AP61247 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
RPS3AP61247 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19■□□□□ 0.63
RPS3AP61247 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RPS3AP61247 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPS3AP61247 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPS3AP61247 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPS3AP61247 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPS3AP61247 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms