Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COPAP53621 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
COPAP53621 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.01■□□□□ 0.95
COPAP53621 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
COPAP53621 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COPAP53621 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.01■□□□□ 0.95
COPAP53621 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COPAP53621 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
COPAP53621 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COPAP53621 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
COPAP53621 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.01■□□□□ 0.95
COPAP53621 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
COPAP53621 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
COPAP53621 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
COPAP53621 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21■□□□□ 0.95
COPAP53621 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21■□□□□ 0.95
COPAP53621 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COPAP53621 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21■□□□□ 0.95
COPAP53621 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21■□□□□ 0.95
COPAP53621 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21■□□□□ 0.95
COPAP53621 OR2A1-AS1-201ENST00000462305 773 ntBASIC21■□□□□ 0.95
COPAP53621 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21■□□□□ 0.95
COPAP53621 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21■□□□□ 0.95
COPAP53621 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
COPAP53621 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
COPAP53621 AC008687.6-201ENST00000596318 630 ntBASIC21■□□□□ 0.95
COPAP53621 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21■□□□□ 0.95
COPAP53621 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COPAP53621 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21■□□□□ 0.95
COPAP53621 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21■□□□□ 0.95
COPAP53621 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21■□□□□ 0.95
COPAP53621 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21■□□□□ 0.95
COPAP53621 LINC01521-201ENST00000504184 1943 ntBASIC21■□□□□ 0.95
COPAP53621 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COPAP53621 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COPAP53621 AC092667.1-201ENST00000434301 2586 ntBASIC20.99■□□□□ 0.95
COPAP53621 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COPAP53621 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
COPAP53621 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.99■□□□□ 0.95
COPAP53621 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COPAP53621 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.99■□□□□ 0.95
COPAP53621 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.99■□□□□ 0.95
COPAP53621 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COPAP53621 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
COPAP53621 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.99■□□□□ 0.95
COPAP53621 KRT17P1-201ENST00000399211 1546 ntBASIC20.99■□□□□ 0.95
COPAP53621 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
COPAP53621 AF106564.1-201ENST00000607058 2553 ntBASIC20.98■□□□□ 0.95
COPAP53621 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPAP53621 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPAP53621 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COPAP53621 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
COPAP53621 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPAP53621 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPAP53621 FEM1AP4-201ENST00000443167 1987 ntBASIC20.98■□□□□ 0.95
COPAP53621 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPAP53621 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.98■□□□□ 0.95
COPAP53621 AL355472.2-201ENST00000422958 438 ntBASIC20.98■□□□□ 0.95
COPAP53621 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.98■□□□□ 0.95
COPAP53621 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.98■□□□□ 0.95
COPAP53621 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COPAP53621 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.98■□□□□ 0.95
COPAP53621 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPAP53621 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPAP53621 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPAP53621 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
COPAP53621 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
COPAP53621 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPAP53621 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
COPAP53621 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.97■□□□□ 0.95
COPAP53621 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.97■□□□□ 0.95
COPAP53621 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COPAP53621 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.97■□□□□ 0.95
COPAP53621 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.97■□□□□ 0.95
COPAP53621 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
COPAP53621 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.97■□□□□ 0.95
COPAP53621 PRORSD1P-201ENST00000295112 541 ntBASIC20.97■□□□□ 0.95
COPAP53621 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COPAP53621 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
COPAP53621 LSM12P1-201ENST00000411836 588 ntBASIC20.97■□□□□ 0.95
COPAP53621 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.97■□□□□ 0.95
COPAP53621 CDV3P1-201ENST00000471403 739 ntBASIC20.97■□□□□ 0.95
COPAP53621 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.97■□□□□ 0.95
COPAP53621 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.97■□□□□ 0.95
COPAP53621 AC100791.3-201ENST00000617619 330 ntBASIC20.97■□□□□ 0.95
COPAP53621 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
COPAP53621 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
COPAP53621 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.97■□□□□ 0.95
COPAP53621 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COPAP53621 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COPAP53621 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COPAP53621 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COPAP53621 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COPAP53621 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COPAP53621 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
COPAP53621 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.96■□□□□ 0.95
COPAP53621 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
COPAP53621 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COPAP53621 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.96■□□□□ 0.95
COPAP53621 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms