Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 tF(GAA)H1tF(GAA)H1 73 nt0.97□□□□□ -2.25
CDC39P25655 tF(GAA)H2tF(GAA)H2 73 nt0.97□□□□□ -2.25
CDC39P25655 tF(GAA)MtF(GAA)M 73 nt0.97□□□□□ -2.25
CDC39P25655 tF(GAA)P1tF(GAA)P1 73 nt0.97□□□□□ -2.25
CDC39P25655 tF(GAA)P2tF(GAA)P2 73 nt0.97□□□□□ -2.25
CDC39P25655 tV(UAC)BtV(UAC)B 74 nt0.97□□□□□ -2.25
CDC39P25655 tV(UAC)DtV(UAC)D 74 nt0.97□□□□□ -2.25
CDC39P25655 INA22YIR024C 651 nt0.97□□□□□ -2.25
CDC39P25655 TMA22YJR014W 597 nt0.97□□□□□ -2.25
CDC39P25655 LSM2YBL026W 288 nt0.97□□□□□ -2.25
CDC39P25655 FAR3YMR052W 615 nt0.97□□□□□ -2.25
CDC39P25655 SPC98YNL126W 2541 nt0.97□□□□□ -2.25
CDC39P25655 ALB1YJL122W 528 nt0.97□□□□□ -2.25
CDC39P25655 AME1YBR211C 975 nt0.97□□□□□ -2.25
CDC39P25655 MET18YIL128W 3099 nt0.97□□□□□ -2.25
CDC39P25655 ROM2YLR371W 4071 nt0.96□□□□□ -2.26
CDC39P25655 HMI1YOL095C 2121 nt0.96□□□□□ -2.26
CDC39P25655 CRM1YGR218W 3255 nt0.96□□□□□ -2.26
CDC39P25655 GIC2YDR309C 1152 nt0.96□□□□□ -2.26
CDC39P25655 PRS3YHL011C 963 nt0.96□□□□□ -2.26
CDC39P25655 PEX27YOR193W 1131 nt0.96□□□□□ -2.26
CDC39P25655 FSH1YHR049W 732 nt0.95□□□□□ -2.26
CDC39P25655 YLR458WYLR458W 381 nt0.95□□□□□ -2.26
CDC39P25655 YOR161W-BYOR161W-B 261 nt0.95□□□□□ -2.26
CDC39P25655 YBR292CYBR292C 372 nt0.95□□□□□ -2.26
CDC39P25655 YSW1YBR148W 1830 nt0.95□□□□□ -2.26
CDC39P25655 CDC36YDL165W 576 nt0.95□□□□□ -2.26
CDC39P25655 YER023C-AYER023C-A 213 nt0.95□□□□□ -2.26
CDC39P25655 TOA1YOR194C 861 nt0.95□□□□□ -2.26
CDC39P25655 RRP15YPR143W 753 nt0.95□□□□□ -2.26
CDC39P25655 AHC1YOR023C 1701 nt0.94□□□□□ -2.26
CDC39P25655 YOL159CYOL159C 516 nt0.94□□□□□ -2.26
CDC39P25655 RAD9YDR217C 3930 nt0.94□□□□□ -2.26
CDC39P25655 NCL1YBL024W 2055 nt0.94□□□□□ -2.26
CDC39P25655 RPS16AYMR143W 432 nt0.94□□□□□ -2.26
CDC39P25655 RXT2YBR095C 1293 nt0.94□□□□□ -2.26
CDC39P25655 ICS2YBR157C 768 nt0.94□□□□□ -2.26
CDC39P25655 YNL034WYNL034W 1839 nt0.93□□□□□ -2.26
CDC39P25655 YFR056CYFR056C 369 nt0.93□□□□□ -2.26
CDC39P25655 NOP10YHR072W-A 177 nt0.93□□□□□ -2.26
CDC39P25655 CLU1YMR012W 3834 nt0.93□□□□□ -2.26
CDC39P25655 YBR062CYBR062C 543 nt0.93□□□□□ -2.26
CDC39P25655 YDR210W-AYDR210W-A 1317 nt0.93□□□□□ -2.26
CDC39P25655 YOR343W-AYOR343W-A 1317 nt0.93□□□□□ -2.26
CDC39P25655 YDR115WYDR115W 318 nt0.92□□□□□ -2.26
CDC39P25655 NEJ1YLR265C 1029 nt0.92□□□□□ -2.26
CDC39P25655 GSP1YLR293C 660 nt0.92□□□□□ -2.26
CDC39P25655 YLR366WYLR366W 306 nt0.92□□□□□ -2.26
CDC39P25655 CUR1YPR158W 759 nt0.92□□□□□ -2.26
CDC39P25655 ECM25YJL201W 1800 nt0.92□□□□□ -2.26
CDC39P25655 SNO3YFL060C 669 nt0.92□□□□□ -2.26
CDC39P25655 ARG3YJL088W 1017 nt0.92□□□□□ -2.26
CDC39P25655 SIP4YJL089W 2490 nt0.92□□□□□ -2.26
CDC39P25655 YMR230W-AYMR230W-A 189 nt0.92□□□□□ -2.26
CDC39P25655 SNO2YNL334C 669 nt0.92□□□□□ -2.26
CDC39P25655 ZRG17YNR039C 1818 nt0.92□□□□□ -2.26
CDC39P25655 IRC14YOR135C 342 nt0.92□□□□□ -2.26
CDC39P25655 SVS1YPL163C 783 nt0.92□□□□□ -2.26
CDC39P25655 RSM22YKL155C 1887 nt0.91□□□□□ -2.26
CDC39P25655 CDC50YCR094W 1176 nt0.91□□□□□ -2.26
CDC39P25655 BTT1YDR252W 450 nt0.91□□□□□ -2.26
CDC39P25655 YGR283CYGR283C 1026 nt0.91□□□□□ -2.26
CDC39P25655 PSF2YJL072C 642 nt0.91□□□□□ -2.26
CDC39P25655 HCH1YNL281W 462 nt0.91□□□□□ -2.26
CDC39P25655 PET20YPL159C 762 nt0.91□□□□□ -2.26
CDC39P25655 EAF1YDR359C 2949 nt0.91□□□□□ -2.26
CDC39P25655 YLR149CYLR149C 2193 nt0.91□□□□□ -2.26
CDC39P25655 UBC9YDL064W 474 nt0.91□□□□□ -2.26
CDC39P25655 GEP7YGL057C 864 nt0.91□□□□□ -2.26
CDC39P25655 YJL119CYJL119C 324 nt0.91□□□□□ -2.26
CDC39P25655 TAP42YMR028W 1101 nt0.91□□□□□ -2.26
CDC39P25655 RIC1YLR039C 3171 nt0.91□□□□□ -2.26
CDC39P25655 POL5YEL055C 3069 nt0.91□□□□□ -2.26
CDC39P25655 SLK19YOR195W 2466 nt0.9□□□□□ -2.26
CDC39P25655 SPT14YPL175W 1359 nt0.9□□□□□ -2.27
CDC39P25655 MEI4YER044C-A 1227 nt0.9□□□□□ -2.27
CDC39P25655 BTN2YGR142W 1233 nt0.9□□□□□ -2.27
CDC39P25655 SPO13YHR014W 876 nt0.9□□□□□ -2.27
CDC39P25655 YET1YKL065C 621 nt0.9□□□□□ -2.27
CDC39P25655 YKE2YLR200W 345 nt0.9□□□□□ -2.27
CDC39P25655 ISF1YMR081C 1017 nt0.9□□□□□ -2.27
CDC39P25655 VID24YBR105C 1089 nt0.9□□□□□ -2.27
CDC39P25655 BST1YFL025C 3090 nt0.9□□□□□ -2.27
CDC39P25655 VMR1YHL035C 4779 nt0.9□□□□□ -2.27
CDC39P25655 SNA4YDL123W 423 nt0.89□□□□□ -2.27
CDC39P25655 PPE1YHR075C 1203 nt0.89□□□□□ -2.27
CDC39P25655 BUD19YJL188C 309 nt0.89□□□□□ -2.27
CDC39P25655 CMC2YBL059C-A 330 nt0.89□□□□□ -2.27
CDC39P25655 SNC2YOR327C 348 nt0.89□□□□□ -2.27
CDC39P25655 RPB5YBR154C 648 nt0.89□□□□□ -2.27
CDC39P25655 NUP145YGL092W 3954 nt0.89□□□□□ -2.27
CDC39P25655 RGA2YDR379W 3030 nt0.89□□□□□ -2.27
CDC39P25655 YDL157CYDL157C 357 nt0.89□□□□□ -2.27
CDC39P25655 EDC1YGL222C 528 nt0.89□□□□□ -2.27
CDC39P25655 HTD2YHR067W 843 nt0.89□□□□□ -2.27
CDC39P25655 RPL40AYIL148W 387 nt0.89□□□□□ -2.27
CDC39P25655 SPC1YJR010C-A 285 nt0.89□□□□□ -2.27
CDC39P25655 AZF1YOR113W 2745 nt0.89□□□□□ -2.27
CDC39P25655 SPO22YIL073C 2928 nt0.89□□□□□ -2.27
CDC39P25655 YCR043CYCR043C 384 nt0.88□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 68.7 ms