Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FAM228BP0C875 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
FAM228BP0C875 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.77■■□□□ 1.08
FAM228BP0C875 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
FAM228BP0C875 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.77■■□□□ 1.08
FAM228BP0C875 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
FAM228BP0C875 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FAM228BP0C875 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.77■■□□□ 1.08
FAM228BP0C875 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
FAM228BP0C875 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.77■■□□□ 1.07
FAM228BP0C875 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
FAM228BP0C875 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
FAM228BP0C875 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
FAM228BP0C875 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
FAM228BP0C875 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
FAM228BP0C875 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FAM228BP0C875 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.76■■□□□ 1.07
FAM228BP0C875 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FAM228BP0C875 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.76■■□□□ 1.07
FAM228BP0C875 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
FAM228BP0C875 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
FAM228BP0C875 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
FAM228BP0C875 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.76■■□□□ 1.07
FAM228BP0C875 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.76■■□□□ 1.07
FAM228BP0C875 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.76■■□□□ 1.07
FAM228BP0C875 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.76■■□□□ 1.07
FAM228BP0C875 KRT18P61-201ENST00000585825 1298 ntBASIC21.76■■□□□ 1.07
FAM228BP0C875 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
FAM228BP0C875 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.76■■□□□ 1.07
FAM228BP0C875 AC243732.1-201ENST00000612648 864 ntBASIC21.76■■□□□ 1.07
FAM228BP0C875 AC007952.6-201ENST00000573168 2673 ntBASIC21.76■■□□□ 1.07
FAM228BP0C875 AC003957.1-201ENST00000625108 2673 ntBASIC21.76■■□□□ 1.07
FAM228BP0C875 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.76■■□□□ 1.07
FAM228BP0C875 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
FAM228BP0C875 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
FAM228BP0C875 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FAM228BP0C875 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FAM228BP0C875 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
FAM228BP0C875 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.75■■□□□ 1.07
FAM228BP0C875 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.75■■□□□ 1.07
FAM228BP0C875 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FAM228BP0C875 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
FAM228BP0C875 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
FAM228BP0C875 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.75■■□□□ 1.07
FAM228BP0C875 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FAM228BP0C875 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.75■■□□□ 1.07
FAM228BP0C875 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.75■■□□□ 1.07
FAM228BP0C875 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.75■■□□□ 1.07
FAM228BP0C875 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FAM228BP0C875 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.74■■□□□ 1.07
FAM228BP0C875 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FAM228BP0C875 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
FAM228BP0C875 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
FAM228BP0C875 SLC7A5P1-201ENST00000568957 537 ntBASIC21.74■■□□□ 1.07
FAM228BP0C875 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FAM228BP0C875 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.74■■□□□ 1.07
FAM228BP0C875 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.74■■□□□ 1.07
FAM228BP0C875 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.74■■□□□ 1.07
FAM228BP0C875 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.74■■□□□ 1.07
FAM228BP0C875 AC019069.1-201ENST00000610008 1333 ntBASIC21.74■■□□□ 1.07
FAM228BP0C875 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FAM228BP0C875 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.74■■□□□ 1.07
FAM228BP0C875 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.74■■□□□ 1.07
FAM228BP0C875 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FAM228BP0C875 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
FAM228BP0C875 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FAM228BP0C875 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FAM228BP0C875 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FAM228BP0C875 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
FAM228BP0C875 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FAM228BP0C875 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.73■■□□□ 1.07
FAM228BP0C875 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
FAM228BP0C875 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FAM228BP0C875 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FAM228BP0C875 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.73■■□□□ 1.07
FAM228BP0C875 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.73■■□□□ 1.07
FAM228BP0C875 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.73■■□□□ 1.07
FAM228BP0C875 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.73■■□□□ 1.07
FAM228BP0C875 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FAM228BP0C875 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FAM228BP0C875 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FAM228BP0C875 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
FAM228BP0C875 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
FAM228BP0C875 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FAM228BP0C875 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FAM228BP0C875 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
FAM228BP0C875 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FAM228BP0C875 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FAM228BP0C875 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
FAM228BP0C875 ZNRF2P3-201ENST00000424200 374 ntBASIC21.72■■□□□ 1.07
FAM228BP0C875 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FAM228BP0C875 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FAM228BP0C875 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FAM228BP0C875 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.72■■□□□ 1.07
FAM228BP0C875 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.72■■□□□ 1.07
FAM228BP0C875 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FAM228BP0C875 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
FAM228BP0C875 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.72■■□□□ 1.07
FAM228BP0C875 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FAM228BP0C875 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms