Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.43■■□□□ 1.18
TPM1P09493 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.43■■□□□ 1.18
TPM1P09493 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TPM1P09493 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.43■■□□□ 1.18
TPM1P09493 AC053503.5-201ENST00000601508 636 ntBASIC22.43■■□□□ 1.18
TPM1P09493 AL136162.1-201ENST00000607711 1078 ntBASIC22.43■■□□□ 1.18
TPM1P09493 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
TPM1P09493 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
TPM1P09493 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TPM1P09493 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC22.43■■□□□ 1.18
TPM1P09493 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.43■■□□□ 1.18
TPM1P09493 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TPM1P09493 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TPM1P09493 AC092720.2-201ENST00000602388 1665 ntBASIC22.42■■□□□ 1.18
TPM1P09493 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TPM1P09493 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TPM1P09493 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TPM1P09493 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TPM1P09493 AC099778.1-201ENST00000568593 1911 ntBASIC22.42■■□□□ 1.18
TPM1P09493 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TPM1P09493 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.42■■□□□ 1.18
TPM1P09493 AC024257.2-201ENST00000549699 147 ntBASIC22.42■■□□□ 1.18
TPM1P09493 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.42■■□□□ 1.18
TPM1P09493 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TPM1P09493 AC112907.3-201ENST00000577781 2400 ntBASIC22.42■■□□□ 1.18
TPM1P09493 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TPM1P09493 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
TPM1P09493 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TPM1P09493 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
TPM1P09493 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TPM1P09493 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TPM1P09493 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC22.42■■□□□ 1.18
TPM1P09493 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TPM1P09493 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
TPM1P09493 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TPM1P09493 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TPM1P09493 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.41■■□□□ 1.18
TPM1P09493 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TPM1P09493 TSPY26P-201ENST00000476365 1326 ntBASIC22.41■■□□□ 1.18
TPM1P09493 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
TPM1P09493 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC22.41■■□□□ 1.18
TPM1P09493 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TPM1P09493 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TPM1P09493 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TPM1P09493 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.41■■□□□ 1.18
TPM1P09493 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.41■■□□□ 1.18
TPM1P09493 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.41■■□□□ 1.18
TPM1P09493 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.41■■□□□ 1.18
TPM1P09493 AC008764.7-201ENST00000593779 1081 ntBASIC22.41■■□□□ 1.18
TPM1P09493 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TPM1P09493 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.41■■□□□ 1.18
TPM1P09493 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TPM1P09493 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TPM1P09493 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TPM1P09493 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TPM1P09493 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC22.4■■□□□ 1.18
TPM1P09493 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
TPM1P09493 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TPM1P09493 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TPM1P09493 AC135279.3-201ENST00000610945 1311 ntBASIC22.4■■□□□ 1.18
TPM1P09493 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TPM1P09493 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
TPM1P09493 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TPM1P09493 EEF1DP3-203ENST00000566025 782 ntBASIC22.4■■□□□ 1.18
TPM1P09493 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.4■■□□□ 1.18
TPM1P09493 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TPM1P09493 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TPM1P09493 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TPM1P09493 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TPM1P09493 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC22.4■■□□□ 1.18
TPM1P09493 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
TPM1P09493 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
TPM1P09493 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC22.39■■□□□ 1.18
TPM1P09493 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
TPM1P09493 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
TPM1P09493 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TPM1P09493 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.39■■□□□ 1.17
TPM1P09493 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TPM1P09493 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TPM1P09493 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
TPM1P09493 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TPM1P09493 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TPM1P09493 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC22.39■■□□□ 1.17
TPM1P09493 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
TPM1P09493 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC22.39■■□□□ 1.17
TPM1P09493 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TPM1P09493 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
TPM1P09493 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
TPM1P09493 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TPM1P09493 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TPM1P09493 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TPM1P09493 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.38■■□□□ 1.17
TPM1P09493 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.38■■□□□ 1.17
TPM1P09493 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TPM1P09493 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.38■■□□□ 1.17
TPM1P09493 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.38■■□□□ 1.17
TPM1P09493 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
TPM1P09493 AC087289.5-201ENST00000586076 3175 ntBASIC22.38■■□□□ 1.17
TPM1P09493 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TPM1P09493 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms