Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HCN1O60741 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HCN1O60741 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HCN1O60741 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
HCN1O60741 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HCN1O60741 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HCN1O60741 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HCN1O60741 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.02■□□□□ 0.64
HCN1O60741 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HCN1O60741 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.02■□□□□ 0.64
HCN1O60741 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HCN1O60741 AC007952.6-201ENST00000573168 2673 ntBASIC19.02■□□□□ 0.63
HCN1O60741 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
HCN1O60741 AC003957.1-201ENST00000625108 2673 ntBASIC19.02■□□□□ 0.63
HCN1O60741 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
HCN1O60741 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
HCN1O60741 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HCN1O60741 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HCN1O60741 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
HCN1O60741 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HCN1O60741 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HCN1O60741 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HCN1O60741 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HCN1O60741 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCN1O60741 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HCN1O60741 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCN1O60741 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.01■□□□□ 0.63
HCN1O60741 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCN1O60741 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCN1O60741 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCN1O60741 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCN1O60741 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.01■□□□□ 0.63
HCN1O60741 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.01■□□□□ 0.63
HCN1O60741 AC133552.2-202ENST00000575694 574 ntBASIC19.01■□□□□ 0.63
HCN1O60741 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCN1O60741 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HCN1O60741 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
HCN1O60741 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCN1O60741 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCN1O60741 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCN1O60741 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HCN1O60741 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCN1O60741 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCN1O60741 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.01■□□□□ 0.63
HCN1O60741 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
HCN1O60741 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HCN1O60741 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HCN1O60741 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HCN1O60741 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HCN1O60741 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19■□□□□ 0.63
HCN1O60741 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HCN1O60741 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
HCN1O60741 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19■□□□□ 0.63
HCN1O60741 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HCN1O60741 AL355802.2-201ENST00000402069 882 ntBASIC19■□□□□ 0.63
HCN1O60741 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
HCN1O60741 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19■□□□□ 0.63
HCN1O60741 APTR-203ENST00000430801 583 ntTSL 5 BASIC19■□□□□ 0.63
HCN1O60741 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19■□□□□ 0.63
HCN1O60741 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19■□□□□ 0.63
HCN1O60741 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HCN1O60741 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
HCN1O60741 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HCN1O60741 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19■□□□□ 0.63
HCN1O60741 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HCN1O60741 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19■□□□□ 0.63
HCN1O60741 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19■□□□□ 0.63
HCN1O60741 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
HCN1O60741 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19■□□□□ 0.63
HCN1O60741 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
HCN1O60741 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
HCN1O60741 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19■□□□□ 0.63
HCN1O60741 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19■□□□□ 0.63
HCN1O60741 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HCN1O60741 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HCN1O60741 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.99■□□□□ 0.63
HCN1O60741 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HCN1O60741 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HCN1O60741 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HCN1O60741 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.99■□□□□ 0.63
HCN1O60741 SLC29A4P1-201ENST00000398760 971 ntBASIC18.99■□□□□ 0.63
HCN1O60741 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.99■□□□□ 0.63
HCN1O60741 TSPY6P-201ENST00000448518 926 ntBASIC18.99■□□□□ 0.63
HCN1O60741 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.99■□□□□ 0.63
HCN1O60741 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.99■□□□□ 0.63
HCN1O60741 AF201337.1-201ENST00000520239 748 ntBASIC18.99■□□□□ 0.63
HCN1O60741 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.99■□□□□ 0.63
HCN1O60741 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HCN1O60741 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HCN1O60741 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
HCN1O60741 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HCN1O60741 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HCN1O60741 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.98■□□□□ 0.63
HCN1O60741 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HCN1O60741 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HCN1O60741 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HCN1O60741 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
HCN1O60741 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HCN1O60741 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HCN1O60741 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms