Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LCMT2O60294 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LCMT2O60294 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LCMT2O60294 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LCMT2O60294 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LCMT2O60294 GPX1P1-201ENST00000388829 606 ntBASIC19.55■□□□□ 0.72
LCMT2O60294 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LCMT2O60294 GUSBP6-202ENST00000438529 1198 ntBASIC19.55■□□□□ 0.72
LCMT2O60294 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.55■□□□□ 0.72
LCMT2O60294 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
LCMT2O60294 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.55■□□□□ 0.72
LCMT2O60294 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LCMT2O60294 CYP2T3P-201ENST00000601990 817 ntBASIC19.55■□□□□ 0.72
LCMT2O60294 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
LCMT2O60294 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LCMT2O60294 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LCMT2O60294 PKD1P6-201ENST00000343738 4769 ntBASIC19.55■□□□□ 0.72
LCMT2O60294 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LCMT2O60294 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LCMT2O60294 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LCMT2O60294 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LCMT2O60294 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LCMT2O60294 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
LCMT2O60294 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LCMT2O60294 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LCMT2O60294 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.54■□□□□ 0.72
LCMT2O60294 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LCMT2O60294 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LCMT2O60294 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.54■□□□□ 0.72
LCMT2O60294 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LCMT2O60294 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
LCMT2O60294 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LCMT2O60294 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.54■□□□□ 0.72
LCMT2O60294 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.54■□□□□ 0.72
LCMT2O60294 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.54■□□□□ 0.72
LCMT2O60294 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.54■□□□□ 0.72
LCMT2O60294 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
LCMT2O60294 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
LCMT2O60294 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.54■□□□□ 0.72
LCMT2O60294 MKRN4P-201ENST00000444706 1521 ntBASIC19.54■□□□□ 0.72
LCMT2O60294 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LCMT2O60294 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
LCMT2O60294 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.54■□□□□ 0.72
LCMT2O60294 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LCMT2O60294 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.54■□□□□ 0.72
LCMT2O60294 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
LCMT2O60294 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LCMT2O60294 AL157384.1-201ENST00000445995 2473 ntBASIC19.53■□□□□ 0.72
LCMT2O60294 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LCMT2O60294 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LCMT2O60294 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.53■□□□□ 0.72
LCMT2O60294 AC087633.2-202ENST00000565166 1439 ntBASIC19.53■□□□□ 0.72
LCMT2O60294 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LCMT2O60294 KRT18P68-201ENST00000392293 1000 ntBASIC19.53■□□□□ 0.72
LCMT2O60294 TSPY6P-201ENST00000448518 926 ntBASIC19.53■□□□□ 0.72
LCMT2O60294 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.53■□□□□ 0.72
LCMT2O60294 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.53■□□□□ 0.72
LCMT2O60294 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.53■□□□□ 0.72
LCMT2O60294 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.53■□□□□ 0.72
LCMT2O60294 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.53■□□□□ 0.72
LCMT2O60294 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.53■□□□□ 0.72
LCMT2O60294 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LCMT2O60294 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.53■□□□□ 0.72
LCMT2O60294 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LCMT2O60294 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LCMT2O60294 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LCMT2O60294 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
LCMT2O60294 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LCMT2O60294 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
LCMT2O60294 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LCMT2O60294 KRT8P36-201ENST00000489121 1440 ntBASIC19.52■□□□□ 0.72
LCMT2O60294 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LCMT2O60294 KRT17P1-201ENST00000399211 1546 ntBASIC19.52■□□□□ 0.72
LCMT2O60294 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LCMT2O60294 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LCMT2O60294 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.52■□□□□ 0.72
LCMT2O60294 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
LCMT2O60294 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.52■□□□□ 0.72
LCMT2O60294 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LCMT2O60294 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
LCMT2O60294 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LCMT2O60294 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LCMT2O60294 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.52■□□□□ 0.72
LCMT2O60294 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LCMT2O60294 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LCMT2O60294 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LCMT2O60294 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LCMT2O60294 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LCMT2O60294 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LCMT2O60294 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LCMT2O60294 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LCMT2O60294 FEM1AP1-201ENST00000431297 1995 ntBASIC19.52■□□□□ 0.71
LCMT2O60294 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LCMT2O60294 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.51■□□□□ 0.71
LCMT2O60294 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LCMT2O60294 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.51■□□□□ 0.71
LCMT2O60294 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LCMT2O60294 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.51■□□□□ 0.71
LCMT2O60294 AL356652.1-201ENST00000615962 565 ntBASIC19.51■□□□□ 0.71
LCMT2O60294 AL109923.1-201ENST00000618799 583 ntBASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms