Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDUFS4O43181 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDUFS4O43181 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.55■□□□□ 0.72
NDUFS4O43181 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NDUFS4O43181 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NDUFS4O43181 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
NDUFS4O43181 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NDUFS4O43181 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.55■□□□□ 0.72
NDUFS4O43181 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.55■□□□□ 0.72
NDUFS4O43181 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NDUFS4O43181 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NDUFS4O43181 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.55■□□□□ 0.72
NDUFS4O43181 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.55■□□□□ 0.72
NDUFS4O43181 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.55■□□□□ 0.72
NDUFS4O43181 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NDUFS4O43181 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.55■□□□□ 0.72
NDUFS4O43181 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.55■□□□□ 0.72
NDUFS4O43181 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
NDUFS4O43181 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.55■□□□□ 0.72
NDUFS4O43181 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
NDUFS4O43181 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NDUFS4O43181 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.55■□□□□ 0.72
NDUFS4O43181 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
NDUFS4O43181 CYP21A1P-202ENST00000354927 1481 ntBASIC19.54■□□□□ 0.72
NDUFS4O43181 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
NDUFS4O43181 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NDUFS4O43181 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.54■□□□□ 0.72
NDUFS4O43181 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NDUFS4O43181 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NDUFS4O43181 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NDUFS4O43181 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NDUFS4O43181 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NDUFS4O43181 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.54■□□□□ 0.72
NDUFS4O43181 AL121832.2-201ENST00000610979 668 ntBASIC19.54■□□□□ 0.72
NDUFS4O43181 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.54■□□□□ 0.72
NDUFS4O43181 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.54■□□□□ 0.72
NDUFS4O43181 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.54■□□□□ 0.72
NDUFS4O43181 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.54■□□□□ 0.72
NDUFS4O43181 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NDUFS4O43181 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NDUFS4O43181 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.54■□□□□ 0.72
NDUFS4O43181 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NDUFS4O43181 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.53■□□□□ 0.72
NDUFS4O43181 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NDUFS4O43181 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.53■□□□□ 0.72
NDUFS4O43181 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
NDUFS4O43181 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NDUFS4O43181 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.53■□□□□ 0.72
NDUFS4O43181 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.53■□□□□ 0.72
NDUFS4O43181 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
NDUFS4O43181 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
NDUFS4O43181 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NDUFS4O43181 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.53■□□□□ 0.72
NDUFS4O43181 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.53■□□□□ 0.72
NDUFS4O43181 AC100791.3-201ENST00000617619 330 ntBASIC19.53■□□□□ 0.72
NDUFS4O43181 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
NDUFS4O43181 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NDUFS4O43181 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NDUFS4O43181 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NDUFS4O43181 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
NDUFS4O43181 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NDUFS4O43181 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.53■□□□□ 0.72
NDUFS4O43181 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NDUFS4O43181 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NDUFS4O43181 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NDUFS4O43181 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NDUFS4O43181 AC010980.2-201ENST00000587099 1412 ntBASIC19.52■□□□□ 0.72
NDUFS4O43181 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.52■□□□□ 0.72
NDUFS4O43181 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
NDUFS4O43181 FEM1AP1-201ENST00000431297 1995 ntBASIC19.52■□□□□ 0.72
NDUFS4O43181 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
NDUFS4O43181 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NDUFS4O43181 MCRIP2P1-201ENST00000394346 511 ntBASIC19.52■□□□□ 0.72
NDUFS4O43181 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.52■□□□□ 0.72
NDUFS4O43181 AL512625.2-201ENST00000417533 625 ntBASIC19.52■□□□□ 0.72
NDUFS4O43181 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.52■□□□□ 0.72
NDUFS4O43181 NCF1B-203ENST00000435988 1254 ntBASIC19.52■□□□□ 0.72
NDUFS4O43181 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.52■□□□□ 0.72
NDUFS4O43181 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.52■□□□□ 0.72
NDUFS4O43181 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NDUFS4O43181 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.52■□□□□ 0.72
NDUFS4O43181 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.52■□□□□ 0.72
NDUFS4O43181 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.52■□□□□ 0.72
NDUFS4O43181 MIR2861-201ENST00000636310 90 ntBASIC19.52■□□□□ 0.72
NDUFS4O43181 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NDUFS4O43181 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NDUFS4O43181 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NDUFS4O43181 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NDUFS4O43181 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NDUFS4O43181 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
NDUFS4O43181 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
NDUFS4O43181 AL157384.1-201ENST00000445995 2473 ntBASIC19.51■□□□□ 0.71
NDUFS4O43181 MKRN4P-201ENST00000444706 1521 ntBASIC19.51■□□□□ 0.71
NDUFS4O43181 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.51■□□□□ 0.71
NDUFS4O43181 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
NDUFS4O43181 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
NDUFS4O43181 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NDUFS4O43181 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.51■□□□□ 0.71
NDUFS4O43181 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.51■□□□□ 0.71
NDUFS4O43181 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms