Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CGB1A6NKQ9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.32■□□□□ 0.2
CGB1A6NKQ9 KRT18P20-201ENST00000548986 1279 ntBASIC16.32■□□□□ 0.2
CGB1A6NKQ9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CGB1A6NKQ9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.32■□□□□ 0.2
CGB1A6NKQ9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CGB1A6NKQ9 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.32■□□□□ 0.2
CGB1A6NKQ9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.32■□□□□ 0.2
CGB1A6NKQ9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CGB1A6NKQ9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CGB1A6NKQ9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.31■□□□□ 0.2
CGB1A6NKQ9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB1A6NKQ9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB1A6NKQ9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.31■□□□□ 0.2
CGB1A6NKQ9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB1A6NKQ9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB1A6NKQ9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB1A6NKQ9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB1A6NKQ9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CGB1A6NKQ9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB1A6NKQ9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CGB1A6NKQ9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CGB1A6NKQ9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB1A6NKQ9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CGB1A6NKQ9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.31■□□□□ 0.2
CGB1A6NKQ9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CGB1A6NKQ9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.31■□□□□ 0.2
CGB1A6NKQ9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB1A6NKQ9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB1A6NKQ9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB1A6NKQ9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB1A6NKQ9 AL391422.3-201ENST00000603791 2761 ntBASIC16.31■□□□□ 0.2
CGB1A6NKQ9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CGB1A6NKQ9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CGB1A6NKQ9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CGB1A6NKQ9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CGB1A6NKQ9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CGB1A6NKQ9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CGB1A6NKQ9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CGB1A6NKQ9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CGB1A6NKQ9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CGB1A6NKQ9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CGB1A6NKQ9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CGB1A6NKQ9 AC091799.1-201ENST00000422823 811 ntBASIC16.3■□□□□ 0.2
CGB1A6NKQ9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CGB1A6NKQ9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CGB1A6NKQ9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.3■□□□□ 0.2
CGB1A6NKQ9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.3■□□□□ 0.2
CGB1A6NKQ9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.3■□□□□ 0.2
CGB1A6NKQ9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.3■□□□□ 0.2
CGB1A6NKQ9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CGB1A6NKQ9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CGB1A6NKQ9 AC116050.2-201ENST00000612102 1779 ntBASIC16.3■□□□□ 0.2
CGB1A6NKQ9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CGB1A6NKQ9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CGB1A6NKQ9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CGB1A6NKQ9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CGB1A6NKQ9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CGB1A6NKQ9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CGB1A6NKQ9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CGB1A6NKQ9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.29■□□□□ 0.2
CGB1A6NKQ9 RBM17P2-201ENST00000616397 1405 ntBASIC16.29■□□□□ 0.2
CGB1A6NKQ9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CGB1A6NKQ9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
CGB1A6NKQ9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CGB1A6NKQ9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.29■□□□□ 0.2
CGB1A6NKQ9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.29■□□□□ 0.2
CGB1A6NKQ9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CGB1A6NKQ9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CGB1A6NKQ9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CGB1A6NKQ9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CGB1A6NKQ9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.29■□□□□ 0.2
CGB1A6NKQ9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CGB1A6NKQ9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CGB1A6NKQ9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.29■□□□□ 0.2
CGB1A6NKQ9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.29■□□□□ 0.2
CGB1A6NKQ9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CGB1A6NKQ9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CGB1A6NKQ9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CGB1A6NKQ9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.29■□□□□ 0.2
CGB1A6NKQ9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.29■□□□□ 0.2
CGB1A6NKQ9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
CGB1A6NKQ9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CGB1A6NKQ9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CGB1A6NKQ9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.28■□□□□ 0.2
CGB1A6NKQ9 AC019069.1-201ENST00000610008 1333 ntBASIC16.28■□□□□ 0.2
CGB1A6NKQ9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CGB1A6NKQ9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CGB1A6NKQ9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.28■□□□□ 0.2
CGB1A6NKQ9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CGB1A6NKQ9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.28■□□□□ 0.2
CGB1A6NKQ9 AC243732.1-201ENST00000612648 864 ntBASIC16.28■□□□□ 0.2
CGB1A6NKQ9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.28■□□□□ 0.2
CGB1A6NKQ9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CGB1A6NKQ9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CGB1A6NKQ9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CGB1A6NKQ9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CGB1A6NKQ9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CGB1A6NKQ9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CGB1A6NKQ9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms