Protein–RNA interactions for Protein: Q9R0P9

Uchl1, Ubiquitin carboxyl-terminal hydrolase isozyme L1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uchl1Q9R0P9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Uchl1Q9R0P9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.39■■□□□ 1.01
Uchl1Q9R0P9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Uchl1Q9R0P9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Uchl1Q9R0P9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Uchl1Q9R0P9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Uchl1Q9R0P9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Uchl1Q9R0P9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
Uchl1Q9R0P9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Uchl1Q9R0P9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Uchl1Q9R0P9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Uchl1Q9R0P9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.34■■□□□ 1.01
Uchl1Q9R0P9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.34■■□□□ 1.01
Uchl1Q9R0P9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Uchl1Q9R0P9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Uchl1Q9R0P9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Uchl1Q9R0P9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
Uchl1Q9R0P9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.3■■□□□ 1
Uchl1Q9R0P9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Uchl1Q9R0P9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Uchl1Q9R0P9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Uchl1Q9R0P9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.29■■□□□ 1
Uchl1Q9R0P9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Uchl1Q9R0P9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Uchl1Q9R0P9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Uchl1Q9R0P9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Uchl1Q9R0P9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Uchl1Q9R0P9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Uchl1Q9R0P9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Uchl1Q9R0P9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.25■□□□□ 0.99
Uchl1Q9R0P9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Uchl1Q9R0P9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Uchl1Q9R0P9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Uchl1Q9R0P9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
Uchl1Q9R0P9 Peli2-204ENSMUST00000226513 1320 ntBASIC21.23■□□□□ 0.99
Uchl1Q9R0P9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.23■□□□□ 0.99
Uchl1Q9R0P9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Uchl1Q9R0P9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Uchl1Q9R0P9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Uchl1Q9R0P9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Uchl1Q9R0P9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.22■□□□□ 0.99
Uchl1Q9R0P9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Uchl1Q9R0P9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Uchl1Q9R0P9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Uchl1Q9R0P9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Uchl1Q9R0P9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Uchl1Q9R0P9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Uchl1Q9R0P9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Uchl1Q9R0P9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Uchl1Q9R0P9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.17■□□□□ 0.98
Uchl1Q9R0P9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Uchl1Q9R0P9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Uchl1Q9R0P9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Uchl1Q9R0P9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Uchl1Q9R0P9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Uchl1Q9R0P9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Uchl1Q9R0P9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Uchl1Q9R0P9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Uchl1Q9R0P9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Uchl1Q9R0P9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Uchl1Q9R0P9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Uchl1Q9R0P9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Uchl1Q9R0P9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Uchl1Q9R0P9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Uchl1Q9R0P9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Uchl1Q9R0P9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Uchl1Q9R0P9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Uchl1Q9R0P9 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.12■□□□□ 0.97
Uchl1Q9R0P9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.12■□□□□ 0.97
Uchl1Q9R0P9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Uchl1Q9R0P9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Uchl1Q9R0P9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Uchl1Q9R0P9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Uchl1Q9R0P9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Uchl1Q9R0P9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Uchl1Q9R0P9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Uchl1Q9R0P9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Uchl1Q9R0P9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Uchl1Q9R0P9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Uchl1Q9R0P9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Uchl1Q9R0P9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Uchl1Q9R0P9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Uchl1Q9R0P9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Uchl1Q9R0P9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.06■□□□□ 0.96
Uchl1Q9R0P9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Uchl1Q9R0P9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Uchl1Q9R0P9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Uchl1Q9R0P9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Uchl1Q9R0P9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Uchl1Q9R0P9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Uchl1Q9R0P9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Uchl1Q9R0P9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Uchl1Q9R0P9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Uchl1Q9R0P9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Uchl1Q9R0P9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Uchl1Q9R0P9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Uchl1Q9R0P9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Uchl1Q9R0P9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Uchl1Q9R0P9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Uchl1Q9R0P9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms