Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61bQ9CQS8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61bQ9CQS8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61bQ9CQS8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC13.08□□□□□ -0.32
Sec61bQ9CQS8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61bQ9CQS8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61bQ9CQS8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61bQ9CQS8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sec61bQ9CQS8 Gm11599-201ENSMUST00000118720 878 ntBASIC13.06□□□□□ -0.32
Sec61bQ9CQS8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC13.06□□□□□ -0.32
Sec61bQ9CQS8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC13.06□□□□□ -0.32
Sec61bQ9CQS8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61bQ9CQS8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
Sec61bQ9CQS8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC13.05□□□□□ -0.32
Sec61bQ9CQS8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61bQ9CQS8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61bQ9CQS8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61bQ9CQS8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61bQ9CQS8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61bQ9CQS8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC13.04□□□□□ -0.32
Sec61bQ9CQS8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61bQ9CQS8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61bQ9CQS8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61bQ9CQS8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61bQ9CQS8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
Sec61bQ9CQS8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61bQ9CQS8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61bQ9CQS8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61bQ9CQS8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61bQ9CQS8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Sec61bQ9CQS8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC13.02□□□□□ -0.33
Sec61bQ9CQS8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC13.02□□□□□ -0.33
Sec61bQ9CQS8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Sec61bQ9CQS8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sec61bQ9CQS8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61bQ9CQS8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61bQ9CQS8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61bQ9CQS8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61bQ9CQS8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
Sec61bQ9CQS8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Sec61bQ9CQS8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61bQ9CQS8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61bQ9CQS8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61bQ9CQS8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61bQ9CQS8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61bQ9CQS8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61bQ9CQS8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC12.97□□□□□ -0.33
Sec61bQ9CQS8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC12.97□□□□□ -0.33
Sec61bQ9CQS8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Sec61bQ9CQS8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61bQ9CQS8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61bQ9CQS8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Sec61bQ9CQS8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61bQ9CQS8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC12.96□□□□□ -0.33
Sec61bQ9CQS8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61bQ9CQS8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sec61bQ9CQS8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sec61bQ9CQS8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61bQ9CQS8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61bQ9CQS8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61bQ9CQS8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61bQ9CQS8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sec61bQ9CQS8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC12.94□□□□□ -0.34
Sec61bQ9CQS8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61bQ9CQS8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
Sec61bQ9CQS8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC12.93□□□□□ -0.34
Sec61bQ9CQS8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61bQ9CQS8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61bQ9CQS8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sec61bQ9CQS8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC12.92□□□□□ -0.34
Sec61bQ9CQS8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61bQ9CQS8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61bQ9CQS8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61bQ9CQS8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC12.91□□□□□ -0.34
Sec61bQ9CQS8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC12.91□□□□□ -0.34
Sec61bQ9CQS8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61bQ9CQS8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Sec61bQ9CQS8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC12.91□□□□□ -0.34
Sec61bQ9CQS8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61bQ9CQS8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61bQ9CQS8 Gm6345-201ENSMUST00000180378 1691 ntBASIC12.9□□□□□ -0.34
Sec61bQ9CQS8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC12.9□□□□□ -0.34
Sec61bQ9CQS8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61bQ9CQS8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Sec61bQ9CQS8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Sec61bQ9CQS8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Sec61bQ9CQS8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC12.89□□□□□ -0.35
Sec61bQ9CQS8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Sec61bQ9CQS8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61bQ9CQS8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61bQ9CQS8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61bQ9CQS8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61bQ9CQS8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61bQ9CQS8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61bQ9CQS8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC12.87□□□□□ -0.35
Sec61bQ9CQS8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61bQ9CQS8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61bQ9CQS8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61bQ9CQS8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sec61bQ9CQS8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms