Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Trim34aQ99PP6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
Trim34aQ99PP6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Trim34aQ99PP6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Trim34aQ99PP6 Gm11599-201ENSMUST00000118720 878 ntBASIC30.65■■■□□ 2.5
Trim34aQ99PP6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Trim34aQ99PP6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC30.64■■■□□ 2.5
Trim34aQ99PP6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
Trim34aQ99PP6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Trim34aQ99PP6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC30.63■■■□□ 2.49
Trim34aQ99PP6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Trim34aQ99PP6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC30.62■■■□□ 2.49
Trim34aQ99PP6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Trim34aQ99PP6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Trim34aQ99PP6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Trim34aQ99PP6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC30.6■■■□□ 2.49
Trim34aQ99PP6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC30.59■■■□□ 2.49
Trim34aQ99PP6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC30.59■■■□□ 2.49
Trim34aQ99PP6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Trim34aQ99PP6 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.58■■■□□ 2.49
Trim34aQ99PP6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC30.58■■■□□ 2.49
Trim34aQ99PP6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.58■■■□□ 2.49
Trim34aQ99PP6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Trim34aQ99PP6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Trim34aQ99PP6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC30.56■■■□□ 2.48
Trim34aQ99PP6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC30.55■■■□□ 2.48
Trim34aQ99PP6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
Trim34aQ99PP6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Trim34aQ99PP6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Trim34aQ99PP6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Trim34aQ99PP6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
Trim34aQ99PP6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Trim34aQ99PP6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Trim34aQ99PP6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Trim34aQ99PP6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Trim34aQ99PP6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC30.48■■■□□ 2.47
Trim34aQ99PP6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Trim34aQ99PP6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Trim34aQ99PP6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC30.45■■■□□ 2.47
Trim34aQ99PP6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
Trim34aQ99PP6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC30.43■■■□□ 2.46
Trim34aQ99PP6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Trim34aQ99PP6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC30.42■■■□□ 2.46
Trim34aQ99PP6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Trim34aQ99PP6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Trim34aQ99PP6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
Trim34aQ99PP6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Trim34aQ99PP6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Trim34aQ99PP6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC30.39■■■□□ 2.46
Trim34aQ99PP6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
Trim34aQ99PP6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC30.39■■■□□ 2.45
Trim34aQ99PP6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
Trim34aQ99PP6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Trim34aQ99PP6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
Trim34aQ99PP6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC30.38■■■□□ 2.45
Trim34aQ99PP6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
Trim34aQ99PP6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC30.37■■■□□ 2.45
Trim34aQ99PP6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC30.37■■■□□ 2.45
Trim34aQ99PP6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Trim34aQ99PP6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC30.33■■■□□ 2.45
Trim34aQ99PP6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Trim34aQ99PP6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC30.31■■■□□ 2.44
Trim34aQ99PP6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
Trim34aQ99PP6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Trim34aQ99PP6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Trim34aQ99PP6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Trim34aQ99PP6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC30.29■■■□□ 2.44
Trim34aQ99PP6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Trim34aQ99PP6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Trim34aQ99PP6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Trim34aQ99PP6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Trim34aQ99PP6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Trim34aQ99PP6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC30.26■■■□□ 2.43
Trim34aQ99PP6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Trim34aQ99PP6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Trim34aQ99PP6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Trim34aQ99PP6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
Trim34aQ99PP6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Trim34aQ99PP6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC30.23■■■□□ 2.43
Trim34aQ99PP6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
Trim34aQ99PP6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.21■■■□□ 2.43
Trim34aQ99PP6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Trim34aQ99PP6 Gm30023-201ENSMUST00000197970 889 ntBASIC30.2■■■□□ 2.43
Trim34aQ99PP6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Trim34aQ99PP6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Trim34aQ99PP6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Trim34aQ99PP6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
Trim34aQ99PP6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Trim34aQ99PP6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Trim34aQ99PP6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC30.16■■■□□ 2.42
Trim34aQ99PP6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
Trim34aQ99PP6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC30.16■■■□□ 2.42
Trim34aQ99PP6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC30.15■■■□□ 2.42
Trim34aQ99PP6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Trim34aQ99PP6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
Trim34aQ99PP6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.41
Trim34aQ99PP6 Pcf11-205ENSMUST00000208255 1720 ntBASIC30.13■■■□□ 2.41
Trim34aQ99PP6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Trim34aQ99PP6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Trim34aQ99PP6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms