Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.57■■□□□ 1.04
Raf1Q99N57 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Raf1Q99N57 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Raf1Q99N57 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Raf1Q99N57 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Raf1Q99N57 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Raf1Q99N57 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Raf1Q99N57 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.55■■□□□ 1.04
Raf1Q99N57 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.55■■□□□ 1.04
Raf1Q99N57 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Raf1Q99N57 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Raf1Q99N57 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Raf1Q99N57 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Raf1Q99N57 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Raf1Q99N57 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Raf1Q99N57 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Raf1Q99N57 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.5■■□□□ 1.03
Raf1Q99N57 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Raf1Q99N57 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Raf1Q99N57 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Raf1Q99N57 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Raf1Q99N57 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
Raf1Q99N57 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Raf1Q99N57 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Raf1Q99N57 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Raf1Q99N57 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Raf1Q99N57 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Raf1Q99N57 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Raf1Q99N57 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Raf1Q99N57 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Raf1Q99N57 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Raf1Q99N57 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Raf1Q99N57 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.46■■□□□ 1.03
Raf1Q99N57 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Raf1Q99N57 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Raf1Q99N57 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Raf1Q99N57 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Raf1Q99N57 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Raf1Q99N57 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Raf1Q99N57 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Raf1Q99N57 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Raf1Q99N57 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Raf1Q99N57 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Raf1Q99N57 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Raf1Q99N57 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Raf1Q99N57 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Raf1Q99N57 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Raf1Q99N57 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Raf1Q99N57 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Raf1Q99N57 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Raf1Q99N57 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Raf1Q99N57 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Raf1Q99N57 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Raf1Q99N57 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Raf1Q99N57 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Raf1Q99N57 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Raf1Q99N57 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
Raf1Q99N57 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Raf1Q99N57 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Raf1Q99N57 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Raf1Q99N57 Gm9397-201ENSMUST00000200125 605 ntBASIC21.35■■□□□ 1.01
Raf1Q99N57 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Raf1Q99N57 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Raf1Q99N57 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Raf1Q99N57 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Raf1Q99N57 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Raf1Q99N57 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Raf1Q99N57 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.33■■□□□ 1
Raf1Q99N57 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Raf1Q99N57 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Raf1Q99N57 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Raf1Q99N57 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Raf1Q99N57 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Raf1Q99N57 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Raf1Q99N57 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Raf1Q99N57 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Raf1Q99N57 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Raf1Q99N57 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Raf1Q99N57 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Raf1Q99N57 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Raf1Q99N57 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.28■■□□□ 1
Raf1Q99N57 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.28■■□□□ 1
Raf1Q99N57 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Raf1Q99N57 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.27■■□□□ 1
Raf1Q99N57 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Raf1Q99N57 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.27■□□□□ 0.99
Raf1Q99N57 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Raf1Q99N57 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.26■□□□□ 0.99
Raf1Q99N57 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Raf1Q99N57 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.26■□□□□ 0.99
Raf1Q99N57 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Raf1Q99N57 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Raf1Q99N57 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Raf1Q99N57 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Raf1Q99N57 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Raf1Q99N57 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Raf1Q99N57 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.23■□□□□ 0.99
Raf1Q99N57 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Raf1Q99N57 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Raf1Q99N57 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms