Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhgc3Q91XX1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhgc3Q91XX1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdhgc3Q91XX1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhgc3Q91XX1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhgc3Q91XX1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhgc3Q91XX1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhgc3Q91XX1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Pcdhgc3Q91XX1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgc3Q91XX1 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgc3Q91XX1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
Pcdhgc3Q91XX1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgc3Q91XX1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgc3Q91XX1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgc3Q91XX1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhgc3Q91XX1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhgc3Q91XX1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.8■■□□□ 1.24
Pcdhgc3Q91XX1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhgc3Q91XX1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhgc3Q91XX1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.78■■□□□ 1.24
Pcdhgc3Q91XX1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhgc3Q91XX1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
Pcdhgc3Q91XX1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhgc3Q91XX1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Pcdhgc3Q91XX1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhgc3Q91XX1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhgc3Q91XX1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.75■■□□□ 1.23
Pcdhgc3Q91XX1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhgc3Q91XX1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhgc3Q91XX1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhgc3Q91XX1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhgc3Q91XX1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhgc3Q91XX1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhgc3Q91XX1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhgc3Q91XX1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Pcdhgc3Q91XX1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhgc3Q91XX1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhgc3Q91XX1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhgc3Q91XX1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhgc3Q91XX1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhgc3Q91XX1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhgc3Q91XX1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Pcdhgc3Q91XX1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhgc3Q91XX1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhgc3Q91XX1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Pcdhgc3Q91XX1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhgc3Q91XX1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Pcdhgc3Q91XX1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhgc3Q91XX1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhgc3Q91XX1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhgc3Q91XX1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhgc3Q91XX1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhgc3Q91XX1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgc3Q91XX1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgc3Q91XX1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgc3Q91XX1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgc3Q91XX1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhgc3Q91XX1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhgc3Q91XX1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhgc3Q91XX1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhgc3Q91XX1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.58■■□□□ 1.21
Pcdhgc3Q91XX1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Pcdhgc3Q91XX1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhgc3Q91XX1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhgc3Q91XX1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhgc3Q91XX1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.57■■□□□ 1.2
Pcdhgc3Q91XX1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhgc3Q91XX1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhgc3Q91XX1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhgc3Q91XX1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.56■■□□□ 1.2
Pcdhgc3Q91XX1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Pcdhgc3Q91XX1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhgc3Q91XX1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhgc3Q91XX1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhgc3Q91XX1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhgc3Q91XX1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhgc3Q91XX1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhgc3Q91XX1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhgc3Q91XX1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhgc3Q91XX1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.52■■□□□ 1.2
Pcdhgc3Q91XX1 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.52■■□□□ 1.2
Pcdhgc3Q91XX1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.51■■□□□ 1.19
Pcdhgc3Q91XX1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.51■■□□□ 1.19
Pcdhgc3Q91XX1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhgc3Q91XX1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhgc3Q91XX1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhgc3Q91XX1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhgc3Q91XX1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhgc3Q91XX1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Pcdhgc3Q91XX1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhgc3Q91XX1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Pcdhgc3Q91XX1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhgc3Q91XX1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhgc3Q91XX1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
Pcdhgc3Q91XX1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhgc3Q91XX1 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.46■■□□□ 1.19
Pcdhgc3Q91XX1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhgc3Q91XX1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhgc3Q91XX1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Pcdhgc3Q91XX1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms