Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Pcdhgc5Q91XW9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Pcdhgc5Q91XW9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC27.78■■■□□ 2.04
Pcdhgc5Q91XW9 Gm7432-201ENSMUST00000210343 879 ntBASIC27.78■■■□□ 2.04
Pcdhgc5Q91XW9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Pcdhgc5Q91XW9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
Pcdhgc5Q91XW9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Pcdhgc5Q91XW9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Pcdhgc5Q91XW9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Pcdhgc5Q91XW9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC27.75■■■□□ 2.03
Pcdhgc5Q91XW9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Pcdhgc5Q91XW9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Pcdhgc5Q91XW9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
Pcdhgc5Q91XW9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Pcdhgc5Q91XW9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
Pcdhgc5Q91XW9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Pcdhgc5Q91XW9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Pcdhgc5Q91XW9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Pcdhgc5Q91XW9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Pcdhgc5Q91XW9 Gm30346-201ENSMUST00000218641 1699 ntBASIC27.68■■■□□ 2.02
Pcdhgc5Q91XW9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.68■■■□□ 2.02
Pcdhgc5Q91XW9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Pcdhgc5Q91XW9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
Pcdhgc5Q91XW9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Pcdhgc5Q91XW9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Pcdhgc5Q91XW9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Pcdhgc5Q91XW9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Pcdhgc5Q91XW9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC27.66■■■□□ 2.02
Pcdhgc5Q91XW9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Pcdhgc5Q91XW9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Pcdhgc5Q91XW9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Pcdhgc5Q91XW9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
Pcdhgc5Q91XW9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Pcdhgc5Q91XW9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Pcdhgc5Q91XW9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC27.65■■■□□ 2.02
Pcdhgc5Q91XW9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC27.65■■■□□ 2.02
Pcdhgc5Q91XW9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.65■■■□□ 2.02
Pcdhgc5Q91XW9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
Pcdhgc5Q91XW9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.01
Pcdhgc5Q91XW9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Pcdhgc5Q91XW9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.63■■■□□ 2.01
Pcdhgc5Q91XW9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC27.61■■■□□ 2.01
Pcdhgc5Q91XW9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
Pcdhgc5Q91XW9 Gm11599-201ENSMUST00000118720 878 ntBASIC27.59■■■□□ 2.01
Pcdhgc5Q91XW9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Pcdhgc5Q91XW9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Pcdhgc5Q91XW9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Pcdhgc5Q91XW9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC27.58■■■□□ 2.01
Pcdhgc5Q91XW9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Pcdhgc5Q91XW9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
Pcdhgc5Q91XW9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC27.57■■■□□ 2
Pcdhgc5Q91XW9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC27.57■■■□□ 2
Pcdhgc5Q91XW9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27.55■■■□□ 2
Pcdhgc5Q91XW9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
Pcdhgc5Q91XW9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
Pcdhgc5Q91XW9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Pcdhgc5Q91XW9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
Pcdhgc5Q91XW9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Pcdhgc5Q91XW9 Gm11175-201ENSMUST00000116172 543 ntBASIC27.52■■■□□ 2
Pcdhgc5Q91XW9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■■□□ 2
Pcdhgc5Q91XW9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.51■■□□□ 1.99
Pcdhgc5Q91XW9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC27.5■■□□□ 1.99
Pcdhgc5Q91XW9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC27.5■■□□□ 1.99
Pcdhgc5Q91XW9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.49■■□□□ 1.99
Pcdhgc5Q91XW9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Pcdhgc5Q91XW9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Pcdhgc5Q91XW9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Pcdhgc5Q91XW9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
Pcdhgc5Q91XW9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Pcdhgc5Q91XW9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Pcdhgc5Q91XW9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Pcdhgc5Q91XW9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Pcdhgc5Q91XW9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Pcdhgc5Q91XW9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.45■■□□□ 1.98
Pcdhgc5Q91XW9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Pcdhgc5Q91XW9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Pcdhgc5Q91XW9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Pcdhgc5Q91XW9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Pcdhgc5Q91XW9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Pcdhgc5Q91XW9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
Pcdhgc5Q91XW9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC27.42■■□□□ 1.98
Pcdhgc5Q91XW9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
Pcdhgc5Q91XW9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Pcdhgc5Q91XW9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Pcdhgc5Q91XW9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Pcdhgc5Q91XW9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
Pcdhgc5Q91XW9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
Pcdhgc5Q91XW9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Pcdhgc5Q91XW9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC27.39■■□□□ 1.98
Pcdhgc5Q91XW9 Gm43445-201ENSMUST00000198564 2091 ntBASIC27.39■■□□□ 1.97
Pcdhgc5Q91XW9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
Pcdhgc5Q91XW9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Pcdhgc5Q91XW9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Pcdhgc5Q91XW9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
Pcdhgc5Q91XW9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC27.37■■□□□ 1.97
Pcdhgc5Q91XW9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC27.35■■□□□ 1.97
Pcdhgc5Q91XW9 Mir6538-201ENSMUST00000183713 110 ntBASIC27.35■■□□□ 1.97
Pcdhgc5Q91XW9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
Pcdhgc5Q91XW9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Pcdhgc5Q91XW9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms