Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC29.5■■■□□ 2.31
Slc44a4Q91VA1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
Slc44a4Q91VA1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC29.5■■■□□ 2.31
Slc44a4Q91VA1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Slc44a4Q91VA1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Slc44a4Q91VA1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Slc44a4Q91VA1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
Slc44a4Q91VA1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC29.48■■■□□ 2.31
Slc44a4Q91VA1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Slc44a4Q91VA1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Slc44a4Q91VA1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
Slc44a4Q91VA1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Slc44a4Q91VA1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC29.43■■■□□ 2.3
Slc44a4Q91VA1 Gm6345-201ENSMUST00000180378 1691 ntBASIC29.41■■■□□ 2.3
Slc44a4Q91VA1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Slc44a4Q91VA1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Slc44a4Q91VA1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
Slc44a4Q91VA1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Slc44a4Q91VA1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Slc44a4Q91VA1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Slc44a4Q91VA1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
Slc44a4Q91VA1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Slc44a4Q91VA1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
Slc44a4Q91VA1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Slc44a4Q91VA1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Slc44a4Q91VA1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC29.37■■■□□ 2.29
Slc44a4Q91VA1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
Slc44a4Q91VA1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Slc44a4Q91VA1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
Slc44a4Q91VA1 Gm11599-201ENSMUST00000118720 878 ntBASIC29.36■■■□□ 2.29
Slc44a4Q91VA1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Slc44a4Q91VA1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC29.34■■■□□ 2.29
Slc44a4Q91VA1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Slc44a4Q91VA1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC29.33■■■□□ 2.29
Slc44a4Q91VA1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
Slc44a4Q91VA1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC29.31■■■□□ 2.28
Slc44a4Q91VA1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC29.31■■■□□ 2.28
Slc44a4Q91VA1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC29.31■■■□□ 2.28
Slc44a4Q91VA1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Slc44a4Q91VA1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC29.3■■■□□ 2.28
Slc44a4Q91VA1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Slc44a4Q91VA1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Slc44a4Q91VA1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Slc44a4Q91VA1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Slc44a4Q91VA1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC29.26■■■□□ 2.27
Slc44a4Q91VA1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC29.25■■■□□ 2.27
Slc44a4Q91VA1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC29.25■■■□□ 2.27
Slc44a4Q91VA1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Slc44a4Q91VA1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC29.24■■■□□ 2.27
Slc44a4Q91VA1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
Slc44a4Q91VA1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
Slc44a4Q91VA1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Slc44a4Q91VA1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Slc44a4Q91VA1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29.2■■■□□ 2.27
Slc44a4Q91VA1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.26
Slc44a4Q91VA1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC29.17■■■□□ 2.26
Slc44a4Q91VA1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Slc44a4Q91VA1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Slc44a4Q91VA1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Slc44a4Q91VA1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC29.15■■■□□ 2.26
Slc44a4Q91VA1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC29.15■■■□□ 2.26
Slc44a4Q91VA1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Slc44a4Q91VA1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Slc44a4Q91VA1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC29.14■■■□□ 2.26
Slc44a4Q91VA1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Slc44a4Q91VA1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC29.14■■■□□ 2.25
Slc44a4Q91VA1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC29.13■■■□□ 2.25
Slc44a4Q91VA1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Slc44a4Q91VA1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC29.13■■■□□ 2.25
Slc44a4Q91VA1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Slc44a4Q91VA1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC29.13■■■□□ 2.25
Slc44a4Q91VA1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Slc44a4Q91VA1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Slc44a4Q91VA1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Slc44a4Q91VA1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Slc44a4Q91VA1 Gm30023-201ENSMUST00000197970 889 ntBASIC29.1■■■□□ 2.25
Slc44a4Q91VA1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Slc44a4Q91VA1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Slc44a4Q91VA1 Gm11175-201ENSMUST00000116172 543 ntBASIC29.09■■■□□ 2.25
Slc44a4Q91VA1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Slc44a4Q91VA1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Slc44a4Q91VA1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC29.07■■■□□ 2.24
Slc44a4Q91VA1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC29.07■■■□□ 2.24
Slc44a4Q91VA1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC29.06■■■□□ 2.24
Slc44a4Q91VA1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Slc44a4Q91VA1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC29.05■■■□□ 2.24
Slc44a4Q91VA1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC29.04■■■□□ 2.24
Slc44a4Q91VA1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Slc44a4Q91VA1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC29.04■■■□□ 2.24
Slc44a4Q91VA1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Slc44a4Q91VA1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Slc44a4Q91VA1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Slc44a4Q91VA1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Slc44a4Q91VA1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC29.01■■■□□ 2.23
Slc44a4Q91VA1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
Slc44a4Q91VA1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC29■■■□□ 2.23
Slc44a4Q91VA1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC29■■■□□ 2.23
Slc44a4Q91VA1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Slc44a4Q91VA1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Slc44a4Q91VA1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28.98■■■□□ 2.23
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms