Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TraipQ8VIG6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TraipQ8VIG6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TraipQ8VIG6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
TraipQ8VIG6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TraipQ8VIG6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.37■■□□□ 1.81
TraipQ8VIG6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
TraipQ8VIG6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.34■■□□□ 1.81
TraipQ8VIG6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TraipQ8VIG6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
TraipQ8VIG6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TraipQ8VIG6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TraipQ8VIG6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TraipQ8VIG6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.31■■□□□ 1.8
TraipQ8VIG6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
TraipQ8VIG6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TraipQ8VIG6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.3■■□□□ 1.8
TraipQ8VIG6 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.3■■□□□ 1.8
TraipQ8VIG6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TraipQ8VIG6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
TraipQ8VIG6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
TraipQ8VIG6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC26.27■■□□□ 1.8
TraipQ8VIG6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TraipQ8VIG6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.25■■□□□ 1.79
TraipQ8VIG6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TraipQ8VIG6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
TraipQ8VIG6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TraipQ8VIG6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TraipQ8VIG6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
TraipQ8VIG6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TraipQ8VIG6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TraipQ8VIG6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.23■■□□□ 1.79
TraipQ8VIG6 Gm7432-201ENSMUST00000210343 879 ntBASIC26.23■■□□□ 1.79
TraipQ8VIG6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TraipQ8VIG6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TraipQ8VIG6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.21■■□□□ 1.79
TraipQ8VIG6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
TraipQ8VIG6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
TraipQ8VIG6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
TraipQ8VIG6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
TraipQ8VIG6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC26.18■■□□□ 1.78
TraipQ8VIG6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
TraipQ8VIG6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
TraipQ8VIG6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.17■■□□□ 1.78
TraipQ8VIG6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC26.17■■□□□ 1.78
TraipQ8VIG6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TraipQ8VIG6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
TraipQ8VIG6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TraipQ8VIG6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
TraipQ8VIG6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
TraipQ8VIG6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TraipQ8VIG6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC26.14■■□□□ 1.78
TraipQ8VIG6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26.13■■□□□ 1.77
TraipQ8VIG6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
TraipQ8VIG6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TraipQ8VIG6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TraipQ8VIG6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.12■■□□□ 1.77
TraipQ8VIG6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.12■■□□□ 1.77
TraipQ8VIG6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
TraipQ8VIG6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
TraipQ8VIG6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
TraipQ8VIG6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC26.1■■□□□ 1.77
TraipQ8VIG6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
TraipQ8VIG6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
TraipQ8VIG6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
TraipQ8VIG6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
TraipQ8VIG6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
TraipQ8VIG6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
TraipQ8VIG6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC26.08■■□□□ 1.77
TraipQ8VIG6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TraipQ8VIG6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC26.06■■□□□ 1.76
TraipQ8VIG6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
TraipQ8VIG6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TraipQ8VIG6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TraipQ8VIG6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TraipQ8VIG6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
TraipQ8VIG6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.03■■□□□ 1.76
TraipQ8VIG6 Gm11599-201ENSMUST00000118720 878 ntBASIC26.03■■□□□ 1.76
TraipQ8VIG6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
TraipQ8VIG6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TraipQ8VIG6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
TraipQ8VIG6 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.02■■□□□ 1.76
TraipQ8VIG6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TraipQ8VIG6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.02■■□□□ 1.76
TraipQ8VIG6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TraipQ8VIG6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TraipQ8VIG6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC26■■□□□ 1.75
TraipQ8VIG6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
TraipQ8VIG6 Gm30023-201ENSMUST00000197970 889 ntBASIC25.99■■□□□ 1.75
TraipQ8VIG6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.98■■□□□ 1.75
TraipQ8VIG6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.97■■□□□ 1.75
TraipQ8VIG6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
TraipQ8VIG6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.97■■□□□ 1.75
TraipQ8VIG6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TraipQ8VIG6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.75
TraipQ8VIG6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
TraipQ8VIG6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TraipQ8VIG6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
TraipQ8VIG6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TraipQ8VIG6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 8 ms