Protein–RNA interactions for Protein: Q8R4I1

Atxn7, Ataxin-7, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn7Q8R4I1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC28,89■■■□□ 2,21
Atxn7Q8R4I1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28,88■■■□□ 2,21
Atxn7Q8R4I1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC28,88■■■□□ 2,21
Atxn7Q8R4I1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC28,87■■■□□ 2,21
Atxn7Q8R4I1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC28,87■■■□□ 2,21
Atxn7Q8R4I1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC28,87■■■□□ 2,21
Atxn7Q8R4I1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC28,86■■■□□ 2,21
Atxn7Q8R4I1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC28,85■■■□□ 2,21
Atxn7Q8R4I1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28,85■■■□□ 2,21
Atxn7Q8R4I1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC28,82■■■□□ 2,2
Atxn7Q8R4I1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28,82■■■□□ 2,2
Atxn7Q8R4I1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC28,81■■■□□ 2,2
Atxn7Q8R4I1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC28,81■■■□□ 2,2
Atxn7Q8R4I1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC28,81■■■□□ 2,2
Atxn7Q8R4I1 Gm6345-201ENSMUST00000180378 1691 ntBASIC28,8■■■□□ 2,2
Atxn7Q8R4I1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC28,8■■■□□ 2,2
Atxn7Q8R4I1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC28,79■■■□□ 2,2
Atxn7Q8R4I1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC28,78■■■□□ 2,2
Atxn7Q8R4I1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC28,78■■■□□ 2,2
Atxn7Q8R4I1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC28,78■■■□□ 2,2
Atxn7Q8R4I1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28,78■■■□□ 2,2
Atxn7Q8R4I1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC28,77■■■□□ 2,2
Atxn7Q8R4I1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28,76■■■□□ 2,2
Atxn7Q8R4I1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28,76■■■□□ 2,19
Atxn7Q8R4I1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC28,74■■■□□ 2,19
Atxn7Q8R4I1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28,73■■■□□ 2,19
Atxn7Q8R4I1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28,73■■■□□ 2,19
Atxn7Q8R4I1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC28,72■■■□□ 2,19
Atxn7Q8R4I1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC28,71■■■□□ 2,19
Atxn7Q8R4I1 Gm11599-201ENSMUST00000118720 878 ntBASIC28,71■■■□□ 2,19
Atxn7Q8R4I1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28,71■■■□□ 2,19
Atxn7Q8R4I1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28,7■■■□□ 2,18
Atxn7Q8R4I1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28,69■■■□□ 2,18
Atxn7Q8R4I1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28,69■■■□□ 2,18
Atxn7Q8R4I1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28,69■■■□□ 2,18
Atxn7Q8R4I1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC28,68■■■□□ 2,18
Atxn7Q8R4I1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28,68■■■□□ 2,18
Atxn7Q8R4I1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC28,68■■■□□ 2,18
Atxn7Q8R4I1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28,68■■■□□ 2,18
Atxn7Q8R4I1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28,67■■■□□ 2,18
Atxn7Q8R4I1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC28,66■■■□□ 2,18
Atxn7Q8R4I1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC28,64■■■□□ 2,18
Atxn7Q8R4I1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC28,64■■■□□ 2,18
Atxn7Q8R4I1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28,63■■■□□ 2,17
Atxn7Q8R4I1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28,63■■■□□ 2,17
Atxn7Q8R4I1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28,63■■■□□ 2,17
Atxn7Q8R4I1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC28,63■■■□□ 2,17
Atxn7Q8R4I1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28,61■■■□□ 2,17
Atxn7Q8R4I1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28,61■■■□□ 2,17
Atxn7Q8R4I1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28,61■■■□□ 2,17
Atxn7Q8R4I1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC28,6■■■□□ 2,17
Atxn7Q8R4I1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC28,6■■■□□ 2,17
Atxn7Q8R4I1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28,59■■■□□ 2,17
Atxn7Q8R4I1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28,56■■■□□ 2,16
Atxn7Q8R4I1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC28,56■■■□□ 2,16
Atxn7Q8R4I1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC28,55■■■□□ 2,16
Atxn7Q8R4I1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC28,53■■■□□ 2,16
Atxn7Q8R4I1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC28,53■■■□□ 2,16
Atxn7Q8R4I1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28,53■■■□□ 2,16
Atxn7Q8R4I1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC28,53■■■□□ 2,16
Atxn7Q8R4I1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC28,53■■■□□ 2,16
Atxn7Q8R4I1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28,52■■■□□ 2,16
Atxn7Q8R4I1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28,52■■■□□ 2,16
Atxn7Q8R4I1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28,51■■■□□ 2,15
Atxn7Q8R4I1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC28,51■■■□□ 2,15
Atxn7Q8R4I1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC28,51■■■□□ 2,15
Atxn7Q8R4I1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC28,51■■■□□ 2,15
Atxn7Q8R4I1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC28,51■■■□□ 2,15
Atxn7Q8R4I1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC28,51■■■□□ 2,15
Atxn7Q8R4I1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC28,5■■■□□ 2,15
Atxn7Q8R4I1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC28,5■■■□□ 2,15
Atxn7Q8R4I1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28,49■■■□□ 2,15
Atxn7Q8R4I1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC28,49■■■□□ 2,15
Atxn7Q8R4I1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC28,49■■■□□ 2,15
Atxn7Q8R4I1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC28,48■■■□□ 2,15
Atxn7Q8R4I1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28,48■■■□□ 2,15
Atxn7Q8R4I1 Gm30023-201ENSMUST00000197970 889 ntBASIC28,47■■■□□ 2,15
Atxn7Q8R4I1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28,47■■■□□ 2,15
Atxn7Q8R4I1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28,47■■■□□ 2,15
Atxn7Q8R4I1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28,46■■■□□ 2,15
Atxn7Q8R4I1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC28,46■■■□□ 2,15
Atxn7Q8R4I1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC28,45■■■□□ 2,15
Atxn7Q8R4I1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28,45■■■□□ 2,14
Atxn7Q8R4I1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28,44■■■□□ 2,14
Atxn7Q8R4I1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC28,44■■■□□ 2,14
Atxn7Q8R4I1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC28,43■■■□□ 2,14
Atxn7Q8R4I1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28,42■■■□□ 2,14
Atxn7Q8R4I1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC28,42■■■□□ 2,14
Atxn7Q8R4I1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC28,42■■■□□ 2,14
Atxn7Q8R4I1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC28,41■■■□□ 2,14
Atxn7Q8R4I1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28,41■■■□□ 2,14
Atxn7Q8R4I1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC28,41■■■□□ 2,14
Atxn7Q8R4I1 Gm11175-201ENSMUST00000116172 543 ntBASIC28,39■■■□□ 2,14
Atxn7Q8R4I1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC28,39■■■□□ 2,14
Atxn7Q8R4I1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC28,39■■■□□ 2,14
Atxn7Q8R4I1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC28,38■■■□□ 2,13
Atxn7Q8R4I1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC28,38■■■□□ 2,13
Atxn7Q8R4I1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28,38■■■□□ 2,13
Atxn7Q8R4I1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28,38■■■□□ 2,13
Atxn7Q8R4I1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC28,37■■■□□ 2,13
Retrieved 100 of 76,532 protein–RNA pairs in 21,1 ms